Difference between revisions of "TSS:Hg 104737.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000670637.1:-85 ENST00000424751.3:-99 AK090789:-99 ENST00000653292.1:-173 ENST00000429940.7:-184 AK092104:-184 BC007394:-189 NR_026827:-236 AK293138:-236 ENST00000659650.1:-247 ENST00000667964.1:326 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| − | |distance=- | + | |distance=-85 |
|distance_to_tss=243 | |distance_to_tss=243 | ||
|end=42475742 | |end=42475742 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_032770 | |nearest_refseq=NM_032770 | ||
|nearest_unigene=Hs.55977 | |nearest_unigene=Hs.55977 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=42475726 | |start=42475726 | ||
|start_of_center_position=42475734 | |start_of_center_position=42475734 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000670637.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104737.1 | |tss_id=hg_104737.1 | ||
Revision as of 17:57, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 42475734 |
|---|---|
| End of the center position in the TSS region: | 42475735 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000670637.1 |
|---|---|
| Distance: | -85 |
| Num_trans: | 11 |
| All_trans: | ENST00000670637.1:-85 ENST00000424751.3:-99 AK090789:-99 ENST00000653292.1:-173 ENST00000429940.7:-184 AK092104:-184 BC007394:-189 NR_026827:-236 AK293138:-236 ENST00000659650.1:-247 ENST00000667964.1:326 |
TATA-Box annotation
| Distance to TSS: | 243 |
|---|---|
| Nearest PromoterID: | NR_026827 |
| Entrez ID: | 84856 |
| Nearest Unigene: | Hs.55977 |
| Nearest Refseq: | NM_032770 |
| Nearest Ensembl: | ENSG00000185904 |
| Gene Name: | long intergenic non-protein coding RNA 839 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 839 |
| Gene Type: | ncRNA |
| CpG%: | 0.06 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
