Difference between revisions of "TSS:Hg 104752.1"
From referenceTSS
| Line 7: | Line 7: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-7092 | |distance_to_tss=-7092 | ||
|end=43147810 | |end=43147810 | ||
| Line 13: | Line 13: | ||
|entrez_id=55454 | |entrez_id=55454 | ||
|gc_percent=0.263682 | |gc_percent=0.263682 | ||
| − | |gene_alias=CHGN2 | + | |gene_alias=CHGN2{{!}}ChGn-2{{!}}GALNACT-2{{!}}GALNACT2{{!}}PRO0082{{!}}beta4GalNAcT |
|gene_description=chondroitin sulfate N-acetylgalactosaminyltransferase 2 | |gene_description=chondroitin sulfate N-acetylgalactosaminyltransferase 2 | ||
|gene_name=CSGALNACT2 | |gene_name=CSGALNACT2 | ||
| Line 26: | Line 26: | ||
|start_of_center_position=43147805 | |start_of_center_position=43147805 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-92(ATTTATATAGGC,+,0.00),-4(TGCTTTTTAAAG,-,0.00),-2(CTTTTTAAAGTA,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 17:58, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 43147805 |
|---|---|
| End of the center position in the TSS region: | 43147806 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -7092 |
|---|---|
| Nearest PromoterID: | NM_001319654 |
| Entrez ID: | 55454 |
| Nearest Unigene: | Hs.657569 |
| Nearest Refseq: | NM_018590 |
| Nearest Ensembl: | ENSG00000169826 |
| Gene Name: | CSGALNACT2 |
| Gene Alias: | CHGN2|ChGn-2|GALNACT-2|GALNACT2|PRO0082|beta4GalNAcT |
| Gene Description: | chondroitin sulfate N-acetylgalactosaminyltransferase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.263682 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -92(ATTTATATAGGC,+,0.00),-4(TGCTTTTTAAAG,-,0.00),-2(CTTTTTAAAGTA,+,0.00) |
