Difference between revisions of "TSS:Hg 104785.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK312278:0 AK291508:0 BC053687:0 BC010642:0 | + | |all_trans=ENST00000298299.4:0 NM_006963:0 AK312278:0 AK291508:0 BC053687:0 BC010642:0 BC041139:-425 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=7 |
|end=45000961 | |end=45000961 | ||
|end_of_center_position=45000930 | |end_of_center_position=45000930 | ||
| − | |entrez_id= | + | |entrez_id=7570 |
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
| − | |gene_alias=- | + | |gene_alias=HKR-T1{{!}}KOX15{{!}}ZNF422{{!}}Zfp422 |
| − | |gene_description= | + | |gene_description=zinc finger protein 22 |
|gene_id=7570 | |gene_id=7570 | ||
|gene_name=zinc finger protein 22 | |gene_name=zinc finger protein 22 | ||
| Line 18: | Line 18: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:13012 | |hgnc_mgi_id=HGNC:13012 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000165512 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_006963 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_006963 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.462693 |
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=45000898 | |start=45000898 | ||
|start_of_center_position=45000929 | |start_of_center_position=45000929 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=AK312278 AK291508 BC053687 BC010642 | + | |transcript_name=ENST00000298299.4 NM_006963 AK312278 AK291508 BC053687 BC010642 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104785.1 | |tss_id=hg_104785.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A024R7T4 P17026 |
}} | }} | ||
Revision as of 17:58, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 45000929 |
|---|---|
| End of the center position in the TSS region: | 45000930 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000298299.4 NM_006963 AK312278 AK291508 BC053687 BC010642 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | ENST00000298299.4:0 NM_006963:0 AK312278:0 AK291508:0 BC053687:0 BC010642:0 BC041139:-425 |
TATA-Box annotation
| Distance to TSS: | 7 |
|---|---|
| Nearest PromoterID: | NM_006963 |
| Entrez ID: | 7570 |
| Nearest Unigene: | Hs.462693 |
| Nearest Refseq: | NM_006963 |
| Nearest Ensembl: | ENSG00000165512 |
| Gene Name: | zinc finger protein 22 |
| Gene Alias: | HKR-T1|KOX15|ZNF422|Zfp422 |
| Gene Description: | zinc finger protein 22 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
