Difference between revisions of "TSS:Hg 224336.1"
From referenceTSS
| Line 2: | Line 2: | ||
|ANXA8L2= | |ANXA8L2= | ||
|VAC-beta= | |VAC-beta= | ||
| − | |all_trans= | + | |all_trans=ENST00000616785.1:0 ENST00000611655.1:0 ENST00000620353.1:0 ENST00000619162.5:0 NM_001098845:0 NM_001278923:0 NM_001278924:0 AK313626:0 X16662:0 BC021910:0 AK300191:0 AK307182:0 AK223149:0 ENST00000622769.4:-46 BC008813:-46 KJ905685:67 CU679125:67 ENST00000584982.7:-95 ENST00000613703.4:-95 |
|bA145E20.2= | |bA145E20.2= | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-23 |
|end=46375785 | |end=46375785 | ||
|end_of_center_position=46375754 | |end_of_center_position=46375754 | ||
|entrez_id=728113 | |entrez_id=728113 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| − | |gene_alias=ANXA8 | + | |gene_alias=ANXA8{{!}}ANXA8L2{{!}}VAC-beta{{!}}bA145E20.2 |
| − | |gene_description=annexin A8 | + | |gene_description=annexin A8 like 1 |
| − | |gene_id= | + | |gene_id=728113 |
| − | |gene_name=annexin A8 | + | |gene_name=annexin A8 like 1 |
| − | |gene_source=HGNC:23334 | + | |gene_source=HGNC:23334 |
| − | |gene_symbol=ANXA8L1 | + | |gene_symbol=ANXA8L1 |
|gene_synonyms=bA145E20.2 bA301J7.3 | |gene_synonyms=bA145E20.2 bA301J7.3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC:23334 | + | |hgnc_mgi_id=HGNC:23334 |
|nearest_ensembl=ENSG00000264230 | |nearest_ensembl=ENSG00000264230 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001278924 |
|nearest_refseq=NM_001630 | |nearest_refseq=NM_001630 | ||
|nearest_unigene=Hs.705389 | |nearest_unigene=Hs.705389 | ||
| − | |num_trans= | + | |num_trans=19 |
|species=human | |species=human | ||
|start=46375721 | |start=46375721 | ||
|start_of_center_position=46375753 | |start_of_center_position=46375753 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000616785.1 ENST00000611655.1 ENST00000620353.1 ENST00000619162.5 NM_001098845 NM_001278923 NM_001278924 AK313626 X16662 BC021910 AK300191 AK307182 AK223149 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_224336.1 | |tss_id=hg_224336.1 | ||
Revision as of 09:18, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 46375753 |
|---|---|
| End of the center position in the TSS region: | 46375754 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000616785.1 ENST00000611655.1 ENST00000620353.1 ENST00000619162.5 NM_001098845 NM_001278923 NM_001278924 AK313626 X16662 BC021910 AK300191 AK307182 AK223149 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | ENST00000616785.1:0 ENST00000611655.1:0 ENST00000620353.1:0 ENST00000619162.5:0 NM_001098845:0 NM_001278923:0 NM_001278924:0 AK313626:0 X16662:0 BC021910:0 AK300191:0 AK307182:0 AK223149:0 ENST00000622769.4:-46 BC008813:-46 KJ905685:67 CU679125:67 ENST00000584982.7:-95 ENST00000613703.4:-95 |
TATA-Box annotation
| Distance to TSS: | -23 |
|---|---|
| Nearest PromoterID: | NM_001278924 |
| Entrez ID: | 728113 |
| Nearest Unigene: | Hs.705389 |
| Nearest Refseq: | NM_001630 |
| Nearest Ensembl: | ENSG00000264230 |
| Gene Name: | annexin A8 like 1 |
| Gene Alias: | ANXA8|ANXA8L2|VAC-beta|bA145E20.2 |
| Gene Description: | annexin A8 like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
