Difference between revisions of "TSS:Hg 104895.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|VACHT= | |VACHT= | ||
| − | |all_trans=BC007765:21 ENST00000374115. | + | |all_trans=BC007765:21 ENST00000374115.5:-22 NM_003055:-22 U09210:-31 AK313094:58 CU675799:384 JF432245:384 KJ897576:384 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
|distance=21 | |distance=21 | ||
| − | |distance_to_tss= | + | |distance_to_tss=33 |
|end=49610354 | |end=49610354 | ||
|end_of_center_position=49610343 | |end_of_center_position=49610343 | ||
|entrez_id=6572 | |entrez_id=6572 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
| − | |gene_alias=CMS21 | + | |gene_alias=CMS21{{!}}VACHT |
|gene_description=solute carrier family 18 member A3 | |gene_description=solute carrier family 18 member A3 | ||
|gene_id=6572 | |gene_id=6572 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_003055 | |nearest_refseq=NM_003055 | ||
|nearest_unigene=Hs.654374 | |nearest_unigene=Hs.654374 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=49610331 | |start=49610331 | ||
Revision as of 18:01, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 49610342 |
|---|---|
| End of the center position in the TSS region: | 49610343 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC007765 |
|---|---|
| Distance: | 21 |
| Num_trans: | 8 |
| All_trans: | BC007765:21 ENST00000374115.5:-22 NM_003055:-22 U09210:-31 AK313094:58 CU675799:384 JF432245:384 KJ897576:384 |
TATA-Box annotation
| Distance to TSS: | 33 |
|---|---|
| Nearest PromoterID: | NM_003055 |
| Entrez ID: | 6572 |
| Nearest Unigene: | Hs.654374 |
| Nearest Refseq: | NM_003055 |
| Nearest Ensembl: | ENSG00000187714 |
| Gene Name: | solute carrier family 18 member A3 |
| Gene Alias: | CMS21|VACHT |
| Gene Description: | solute carrier family 18 member A3 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
