Difference between revisions of "TSS:Hg 104901.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000374113.3:0 ENST00000374111. | + | |all_trans=ENST00000374113.3:0 ENST00000374111.8:0 ENST00000374112.7:0 ENST00000535836.1:0 NM_182554:0 NM_001042427:0 AK091773:0 BC028127:0 KJ900538:9 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=12 |
|end=49679689 | |end=49679689 | ||
|end_of_center_position=49679664 | |end_of_center_position=49679664 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_182554 | |nearest_refseq=NM_182554 | ||
|nearest_unigene=Hs.131287 | |nearest_unigene=Hs.131287 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
|start=49679637 | |start=49679637 | ||
|start_of_center_position=49679663 | |start_of_center_position=49679663 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000374113.3 ENST00000374111. | + | |transcript_name=ENST00000374113.3 ENST00000374111.8 ENST00000374112.7 ENST00000535836.1 NM_182554 NM_001042427 AK091773 BC028127 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104901.1 | |tss_id=hg_104901.1 | ||
Revision as of 18:01, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 49679663 |
|---|---|
| End of the center position in the TSS region: | 49679664 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000374113.3 ENST00000374111.8 ENST00000374112.7 ENST00000535836.1 NM_182554 NM_001042427 AK091773 BC028127 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENST00000374113.3:0 ENST00000374111.8:0 ENST00000374112.7:0 ENST00000535836.1:0 NM_182554:0 NM_001042427:0 AK091773:0 BC028127:0 KJ900538:9 |
TATA-Box annotation
| Distance to TSS: | 12 |
|---|---|
| Nearest PromoterID: | NM_001042427 |
| Entrez ID: | 282966 |
| Nearest Unigene: | Hs.131287 |
| Nearest Refseq: | NM_182554 |
| Nearest Ensembl: | ENSG00000178645 |
| Gene Name: | chromosome 10 open reading frame 53 |
| Gene Alias: | - |
| Gene Description: | chromosome 10 open reading frame 53 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
