Difference between revisions of "TSS:Hg 104941.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|SK= | |SK= | ||
| − | |all_trans=NM_012242:0 AK314902:0 | + | |all_trans=ENST00000373970.4:0 NM_012242:0 AK314902:0 BC001539:6 AY359005:8 JN966744:-22 AF127563:28 AF177394:69 CU674754:145 AB528499:145 DQ895421:145 DQ892222:145 KJ893312:145 ENST00000467359.5:390 LF212777:-458 MA448354:-458 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| Line 10: | Line 10: | ||
|entrez_id=22943 | |entrez_id=22943 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
| − | |gene_alias=DKK-1 | + | |gene_alias=DKK-1{{!}}SK |
|gene_description=dickkopf WNT signaling pathway inhibitor 1 | |gene_description=dickkopf WNT signaling pathway inhibitor 1 | ||
|gene_id=22943 | |gene_id=22943 | ||
| Line 28: | Line 28: | ||
|start_of_center_position=52314281 | |start_of_center_position=52314281 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-34(CGGTATAAAGGC,-,0.00) |
| − | |transcript_name=NM_012242 AK314902 | + | |transcript_name=ENST00000373970.4 NM_012242 AK314902 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104941.1 | |tss_id=hg_104941.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=O94907 | + | |uniprot_id=I1W660 O94907 |
}} | }} | ||
Revision as of 18:02, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 52314281 |
|---|---|
| End of the center position in the TSS region: | 52314282 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000373970.4 NM_012242 AK314902 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | ENST00000373970.4:0 NM_012242:0 AK314902:0 BC001539:6 AY359005:8 JN966744:-22 AF127563:28 AF177394:69 CU674754:145 AB528499:145 DQ895421:145 DQ892222:145 KJ893312:145 ENST00000467359.5:390 LF212777:-458 MA448354:-458 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_012242 |
| Entrez ID: | 22943 |
| Nearest Unigene: | Hs.40499 |
| Nearest Refseq: | NM_012242 |
| Nearest Ensembl: | ENSG00000107984 |
| Gene Name: | dickkopf WNT signaling pathway inhibitor 1 |
| Gene Alias: | DKK-1|SK |
| Gene Description: | dickkopf WNT signaling pathway inhibitor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(CGGTATAAAGGC,-,0.00) |
