Difference between revisions of "TSS:Hg 109456.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
− | |all_trans=ENST00000503444 | + | |all_trans=ENST00000503444.1:-27 ENST00000470220.5:92 ENST00000468840.6:-100 NM_001347847:-100 NM_001347845:-100 NM_001347844:-100 NM_001347843:-100 NM_001347848:-100 NM_001143773:-100 NM_001347846:-100 AK299924:-100 ENST00000618427.4:199 ENST00000611933.4:199 NM_001001971:199 NM_001166698:199 NM_001347850:199 NM_001347851:199 NM_001347852:199 NM_001347849:199 BC064431:199 ENST00000622363.4:203 AK316542:203 ENST00000621119.4:229 BC036453:243 ENST00000618804.5:244 NM_198215:244 ENST00000614220.4:246 ENST00000619059.4:271 AK289796:273 AK294805:284 ENST00000435852.6:285 ENST00000422313.6:333 KJ895852:333 KJ900467:333 DQ894404:333 EU176262:333 CU687880:333 ENST00000512919.5:-378 NM_001347842:-378 NM_001347840:-378 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
Line 22: | Line 22: | ||
|nearest_refseq=NM_198215 | |nearest_refseq=NM_198215 | ||
|nearest_unigene=Hs.607594 | |nearest_unigene=Hs.607594 | ||
− | |num_trans= | + | |num_trans=40 |
|species=human | |species=human | ||
|start=59362792 | |start=59362792 | ||
|start_of_center_position=59362797 | |start_of_center_position=59362797 | ||
|strand=- | |strand=- | ||
− | |transcript_name=ENST00000503444 | + | |transcript_name=ENST00000503444.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_109456.1 | |tss_id=hg_109456.1 |
Revision as of 19:47, 15 June 2021
Basic information about the TSS
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Start of the center position in the TSS region: | 59362797 |
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End of the center position in the TSS region: | 59362798 |
Gene and protein annotation
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Transcript annotation
Transcript_name: | ENST00000503444.1 |
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Distance: | -27 |
Num_trans: | 40 |
All_trans: | ENST00000503444.1:-27 ENST00000470220.5:92 ENST00000468840.6:-100 NM_001347847:-100 NM_001347845:-100 NM_001347844:-100 NM_001347843:-100 NM_001347848:-100 NM_001143773:-100 NM_001347846:-100 AK299924:-100 ENST00000618427.4:199 ENST00000611933.4:199 NM_001001971:199 NM_001166698:199 NM_001347850:199 NM_001347851:199 NM_001347852:199 NM_001347849:199 BC064431:199 ENST00000622363.4:203 AK316542:203 ENST00000621119.4:229 BC036453:243 ENST00000618804.5:244 NM_198215:244 ENST00000614220.4:246 ENST00000619059.4:271 AK289796:273 AK294805:284 ENST00000435852.6:285 ENST00000422313.6:333 KJ895852:333 KJ900467:333 DQ894404:333 EU176262:333 CU687880:333 ENST00000512919.5:-378 NM_001347842:-378 NM_001347840:-378 |
TATA-Box annotation
Distance to TSS: | 105 |
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Nearest PromoterID: | NM_001347847 |
Entrez ID: | 220965 |
Nearest Unigene: | Hs.607594 |
Nearest Refseq: | NM_198215 |
Nearest Ensembl: | ENSG00000148541 |
Gene Name: | family with sequence similarity 13 member C |
Gene Alias: | FAM13C1 |
Gene Description: | family with sequence similarity 13 member C |
Gene Type: | protein-coding |
CpG%: | 0.06 |
GC%: | 0.616915 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |