Difference between revisions of "TSS:Hg 105275.1"
From referenceTSS
| Line 2: | Line 2: | ||
|GUB= | |GUB= | ||
|RH-II/GuB= | |RH-II/GuB= | ||
| − | |all_trans= | + | |all_trans=ENST00000483593.5:0 ENST00000373585.8:0 ENST00000471475.1:0 NM_024045:0 BC000272:0 LF384641:0 MA620218:0 AK223297:0 AB051075:0 AF334103:0 AK301431:0 AK293577:0 BC014263:0 CU674120:51 DQ892547:51 DQ895758:51 KJ894630:51 LF322648:491 MA558225:491 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-19 |
|end=68901334 | |end=68901334 | ||
|end_of_center_position=68901297 | |end_of_center_position=68901297 | ||
|entrez_id=79009 | |entrez_id=79009 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| − | |gene_alias=GU2 | + | |gene_alias=GU2{{!}}GUB{{!}}RH-II/GuB{{!}}mcdrh |
|gene_description=DExD-box helicase 50 | |gene_description=DExD-box helicase 50 | ||
|gene_id=79009 | |gene_id=79009 | ||
| − | |gene_name= | + | |gene_name=DExD-box helicase 50 |
|gene_source=HGNC:17906 | |gene_source=HGNC:17906 | ||
|gene_symbol=DDX50 | |gene_symbol=DDX50 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_024045 | |nearest_refseq=NM_024045 | ||
|nearest_unigene=Hs.522984 | |nearest_unigene=Hs.522984 | ||
| − | |num_trans= | + | |num_trans=19 |
|species=human | |species=human | ||
|start=68901258 | |start=68901258 | ||
|start_of_center_position=68901296 | |start_of_center_position=68901296 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000483593.5 ENST00000373585.8 ENST00000471475.1 NM_024045 BC000272 LF384641 MA620218 AK223297 AB051075 AF334103 AK301431 AK293577 BC014263 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105275.1 | |tss_id=hg_105275.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=B4DED6 B4DW97 K0J110 Q53FI9 Q9BQ39 S4R3G6 S4R3V4 |
}} | }} | ||
Revision as of 18:10, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 68901296 |
|---|---|
| End of the center position in the TSS region: | 68901297 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000483593.5 ENST00000373585.8 ENST00000471475.1 NM_024045 BC000272 LF384641 MA620218 AK223297 AB051075 AF334103 AK301431 AK293577 BC014263 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | ENST00000483593.5:0 ENST00000373585.8:0 ENST00000471475.1:0 NM_024045:0 BC000272:0 LF384641:0 MA620218:0 AK223297:0 AB051075:0 AF334103:0 AK301431:0 AK293577:0 BC014263:0 CU674120:51 DQ892547:51 DQ895758:51 KJ894630:51 LF322648:491 MA558225:491 |
TATA-Box annotation
| Distance to TSS: | -19 |
|---|---|
| Nearest PromoterID: | NM_024045 |
| Entrez ID: | 79009 |
| Nearest Unigene: | Hs.522984 |
| Nearest Refseq: | NM_024045 |
| Nearest Ensembl: | ENSG00000107625 |
| Gene Name: | DExD-box helicase 50 |
| Gene Alias: | GU2|GUB|RH-II/GuB|mcdrh |
| Gene Description: | DExD-box helicase 50 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
