Difference between revisions of "TSS:Hg 105329.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000359655.9:352 NM_003171:352 NM_001323588:352 NR_136626:352 NM_001323585:352 NM_001323586:352 NM_001323587:352 NM_001323584:352 NR_136627:352 NM_001301683:352 BC036112:355 LF208770:357 MA444347:357 ENST00000471069.5:368 AK299670:368 AK290416:368 ENST00000483572.5:399 ENST00000422378.1:406 CU690300:410 DQ894183:410 KJ892230:410 AF042169:410 DQ891004:410 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| − | |distance= | + | |distance=352 |
| − | |distance_to_tss=- | + | |distance_to_tss=-353 |
|end=69179882 | |end=69179882 | ||
|end_of_center_position=69179881 | |end_of_center_position=69179881 | ||
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|hgnc_mgi_id=HGNC:11471 | |hgnc_mgi_id=HGNC:11471 | ||
|nearest_ensembl=ENSG00000156502 | |nearest_ensembl=ENSG00000156502 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001323584 |
|nearest_refseq=NM_003171 | |nearest_refseq=NM_003171 | ||
|nearest_unigene=Hs.106469 | |nearest_unigene=Hs.106469 | ||
| − | |num_trans= | + | |num_trans=23 |
|species=human | |species=human | ||
|start=69179879 | |start=69179879 | ||
|start_of_center_position=69179880 | |start_of_center_position=69179880 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NM_001301683 | + | |transcript_name=ENST00000359655.9 NM_003171 NM_001323588 NR_136626 NM_001323585 NM_001323586 NM_001323587 NM_001323584 NR_136627 NM_001301683 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_105329.1 | |tss_id=hg_105329.1 | ||
Revision as of 18:11, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 69179880 |
|---|---|
| End of the center position in the TSS region: | 69179881 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000359655.9 NM_003171 NM_001323588 NR_136626 NM_001323585 NM_001323586 NM_001323587 NM_001323584 NR_136627 NM_001301683 |
|---|---|
| Distance: | 352 |
| Num_trans: | 23 |
| All_trans: | ENST00000359655.9:352 NM_003171:352 NM_001323588:352 NR_136626:352 NM_001323585:352 NM_001323586:352 NM_001323587:352 NM_001323584:352 NR_136627:352 NM_001301683:352 BC036112:355 LF208770:357 MA444347:357 ENST00000471069.5:368 AK299670:368 AK290416:368 ENST00000483572.5:399 ENST00000422378.1:406 CU690300:410 DQ894183:410 KJ892230:410 AF042169:410 DQ891004:410 |
TATA-Box annotation
| Distance to TSS: | -353 |
|---|---|
| Nearest PromoterID: | NM_001323584 |
| Entrez ID: | 6832 |
| Nearest Unigene: | Hs.106469 |
| Nearest Refseq: | NM_003171 |
| Nearest Ensembl: | ENSG00000156502 |
| Gene Name: | Suv3 like RNA helicase |
| Gene Alias: | SUV3 |
| Gene Description: | Suv3 like RNA helicase |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
