Difference between revisions of "TSS:Hg 105421.1"
From referenceTSS
| Line 3: | Line 3: | ||
|HJCD= | |HJCD= | ||
|PHID= | |PHID= | ||
| − | |all_trans=ENST00000373189. | + | |all_trans=ENST00000373189.6:0 ENST00000644591.1:0 ENST00000643752.1:0 NR_033413:0 NM_001174098:0 NM_001363518:0 NR_033414:0 NM_018344:0 AK316152:5 BC120996:8 BC120997:8 AY358686:8 ENST00000644895.1:12 ENST00000647524.1:15 ENST00000479577.2:15 ENST00000642772.1:15 ENST00000644088.1:16 AK304503:16 BC050589:16 ENST00000645345.1:18 AK314497:18 BC063019:21 AY288928:26 ENST00000642198.1:88 ENST00000643619.1:399 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| Line 12: | Line 12: | ||
|entrez_id=55315 | |entrez_id=55315 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
| − | |gene_alias=ENT3 | + | |gene_alias=ENT3{{!}}HCLAP{{!}}HJCD{{!}}PHID |
|gene_description=solute carrier family 29 member 3 | |gene_description=solute carrier family 29 member 3 | ||
|gene_id=55315 | |gene_id=55315 | ||
| Line 22: | Line 22: | ||
|hgnc_mgi_id=HGNC:23096 | |hgnc_mgi_id=HGNC:23096 | ||
|nearest_ensembl=ENSG00000198246 | |nearest_ensembl=ENSG00000198246 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001363518 |
|nearest_refseq=NM_018344 | |nearest_refseq=NM_018344 | ||
|nearest_unigene=Hs.438419 | |nearest_unigene=Hs.438419 | ||
| − | |num_trans= | + | |num_trans=25 |
|species=human | |species=human | ||
|start=71319243 | |start=71319243 | ||
|start_of_center_position=71319255 | |start_of_center_position=71319255 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000373189. | + | |transcript_name=ENST00000373189.6 ENST00000644591.1 ENST00000643752.1 NR_033413 NM_001174098 NM_001363518 NR_033414 NM_018344 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105421.1 | |tss_id=hg_105421.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q9BZD2 | + | |uniprot_id=A0A2R8Y4B7 A0A2R8Y5R8 Q9BZD2 |
}} | }} | ||
Revision as of 18:13, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 71319255 |
|---|---|
| End of the center position in the TSS region: | 71319256 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000373189.6 ENST00000644591.1 ENST00000643752.1 NR_033413 NM_001174098 NM_001363518 NR_033414 NM_018344 |
|---|---|
| Distance: | 0 |
| Num_trans: | 25 |
| All_trans: | ENST00000373189.6:0 ENST00000644591.1:0 ENST00000643752.1:0 NR_033413:0 NM_001174098:0 NM_001363518:0 NR_033414:0 NM_018344:0 AK316152:5 BC120996:8 BC120997:8 AY358686:8 ENST00000644895.1:12 ENST00000647524.1:15 ENST00000479577.2:15 ENST00000642772.1:15 ENST00000644088.1:16 AK304503:16 BC050589:16 ENST00000645345.1:18 AK314497:18 BC063019:21 AY288928:26 ENST00000642198.1:88 ENST00000643619.1:399 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_001363518 |
| Entrez ID: | 55315 |
| Nearest Unigene: | Hs.438419 |
| Nearest Refseq: | NM_018344 |
| Nearest Ensembl: | ENSG00000198246 |
| Gene Name: | solute carrier family 29 member 3 |
| Gene Alias: | ENT3|HCLAP|HJCD|PHID |
| Gene Description: | solute carrier family 29 member 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
