Difference between revisions of "TSS:Hg 105603.1"
From referenceTSS
| Line 4: | Line 4: | ||
|MYST4= | |MYST4= | ||
|ZC2HC6B= | |ZC2HC6B= | ||
| − | |all_trans= | + | |all_trans=ENST00000372714.6:0 ENST00000649442.1:0 ENST00000649657.1:-2 ENST00000648539.1:13 ENST00000647666.1:17 ENST00000648048.1:17 ENST00000287239.10:17 NM_001370132:17 NM_001370144:17 NM_001370142:17 NM_001370137:17 NM_001370135:17 NM_012330:17 AK074816:17 ENST00000649375.1:20 BC014143:38 BC048199:38 AF217500:42 ENST00000650330.1:45 ENST00000650380.1:52 BC150618:70 ENST00000372724.6:-105 LF333257:121 MA568834:121 ENST00000647890.1:-135 ENST00000648892.1:-141 NM_001256468:-141 NM_001256469:-141 LF333256:-179 MA568833:-179 ENST00000647637.1:298 ENST00000372711.2:475 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=-32 |
|end=74826583 | |end=74826583 | ||
|end_of_center_position=74826569 | |end_of_center_position=74826569 | ||
|entrez_id=23522 | |entrez_id=23522 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
| − | |gene_alias=GTPTS | + | |gene_alias=GTPTS{{!}}MORF{{!}}MOZ2{{!}}MYST4{{!}}ZC2HC6B{{!}}qkf{{!}}querkopf |
|gene_description=lysine acetyltransferase 6B | |gene_description=lysine acetyltransferase 6B | ||
|gene_id=23522 | |gene_id=23522 | ||
| Line 23: | Line 23: | ||
|hgnc_mgi_id=HGNC:17582 | |hgnc_mgi_id=HGNC:17582 | ||
|nearest_ensembl=ENSG00000156650 | |nearest_ensembl=ENSG00000156650 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001370137 |
|nearest_refseq=NM_012330 | |nearest_refseq=NM_012330 | ||
|nearest_unigene=Hs.35758 | |nearest_unigene=Hs.35758 | ||
| − | |num_trans= | + | |num_trans=32 |
|qkf= | |qkf= | ||
|querkopf= | |querkopf= | ||
| Line 33: | Line 33: | ||
|start_of_center_position=74826568 | |start_of_center_position=74826568 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000372714.6 ENST00000649442.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105603.1 | |tss_id=hg_105603.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q8WYB5 | + | |uniprot_id=A0A3B3IU70 Q8WYB5 |
}} | }} | ||
Revision as of 18:18, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 74826568 |
|---|---|
| End of the center position in the TSS region: | 74826569 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000372714.6 ENST00000649442.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 32 |
| All_trans: | ENST00000372714.6:0 ENST00000649442.1:0 ENST00000649657.1:-2 ENST00000648539.1:13 ENST00000647666.1:17 ENST00000648048.1:17 ENST00000287239.10:17 NM_001370132:17 NM_001370144:17 NM_001370142:17 NM_001370137:17 NM_001370135:17 NM_012330:17 AK074816:17 ENST00000649375.1:20 BC014143:38 BC048199:38 AF217500:42 ENST00000650330.1:45 ENST00000650380.1:52 BC150618:70 ENST00000372724.6:-105 LF333257:121 MA568834:121 ENST00000647890.1:-135 ENST00000648892.1:-141 NM_001256468:-141 NM_001256469:-141 LF333256:-179 MA568833:-179 ENST00000647637.1:298 ENST00000372711.2:475 |
TATA-Box annotation
| Distance to TSS: | -32 |
|---|---|
| Nearest PromoterID: | NM_001370137 |
| Entrez ID: | 23522 |
| Nearest Unigene: | Hs.35758 |
| Nearest Refseq: | NM_012330 |
| Nearest Ensembl: | ENSG00000156650 |
| Gene Name: | lysine acetyltransferase 6B |
| Gene Alias: | GTPTS|MORF|MOZ2|MYST4|ZC2HC6B|qkf|querkopf |
| Gene Description: | lysine acetyltransferase 6B |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
