Difference between revisions of "TSS:Hg 232397.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000645440.1:0 ENST00000478655.6:25 ENST00000485708.7:25 ENST00000464716.6:25 ENST00000360830.9:25 ENST00000372360.9:25 ENST00000440692.6:25 NM_001142285:25 NM_033022:25 D28424:25 AK311776:25 AK311910:25 BX537975:27 M31520:27 ENST00000645698.1:36 BX647260:36 ENST00000476545.6:39 BC071926:40 AF147330:41 BC000523:45 ENST00000466129.6:48 BC003149:49 ENST00000465692.2:53 ENST00000475468.6:66 ENST00000435275.5:-76 ENST00000613865.5:-76 NM_001026:-76 NM_001142283:-76 NM_001142284:-76 NM_001142282:-76 ENST00000482069.5:79 ENST00000646254.1:372 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=52 | |distance_to_tss=52 | ||
|end=75782813 | |end=75782813 | ||
| Line 9: | Line 9: | ||
|entrez_id=83938 | |entrez_id=83938 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
| − | |gene_alias=CDA017 | + | |gene_alias=C10orf11{{!}}CDA017 |
| − | |gene_description= | + | |gene_description=leucine rich melanocyte differentiation associated |
| − | |gene_id= | + | |gene_id=6229 |
| − | |gene_name= | + | |gene_name=ribosomal protein S24 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:10411 |
| − | |gene_symbol= | + | |gene_symbol=RPS24 |
| − | |gene_synonyms= | + | |gene_synonyms=S24 eS24 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:10411 |
|nearest_ensembl=ENSG00000148655 | |nearest_ensembl=ENSG00000148655 | ||
|nearest_promoter_id=NM_032024 | |nearest_promoter_id=NM_032024 | ||
|nearest_refseq=NM_032024 | |nearest_refseq=NM_032024 | ||
|nearest_unigene=Hs.118161 | |nearest_unigene=Hs.118161 | ||
| − | |num_trans= | + | |num_trans=32 |
|species=human | |species=human | ||
|start=75782812 | |start=75782812 | ||
|start_of_center_position=78033836 | |start_of_center_position=78033836 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000645440.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_232397.1 | |tss_id=hg_232397.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A2R8Y849 |
}} | }} | ||
Revision as of 12:23, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 78033836 |
|---|---|
| End of the center position in the TSS region: | 78033837 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000645440.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 32 |
| All_trans: | ENST00000645440.1:0 ENST00000478655.6:25 ENST00000485708.7:25 ENST00000464716.6:25 ENST00000360830.9:25 ENST00000372360.9:25 ENST00000440692.6:25 NM_001142285:25 NM_033022:25 D28424:25 AK311776:25 AK311910:25 BX537975:27 M31520:27 ENST00000645698.1:36 BX647260:36 ENST00000476545.6:39 BC071926:40 AF147330:41 BC000523:45 ENST00000466129.6:48 BC003149:49 ENST00000465692.2:53 ENST00000475468.6:66 ENST00000435275.5:-76 ENST00000613865.5:-76 NM_001026:-76 NM_001142283:-76 NM_001142284:-76 NM_001142282:-76 ENST00000482069.5:79 ENST00000646254.1:372 |
TATA-Box annotation
| Distance to TSS: | 52 |
|---|---|
| Nearest PromoterID: | NM_032024 |
| Entrez ID: | 83938 |
| Nearest Unigene: | Hs.118161 |
| Nearest Refseq: | NM_032024 |
| Nearest Ensembl: | ENSG00000148655 |
| Gene Name: | ribosomal protein S24 |
| Gene Alias: | C10orf11|CDA017 |
| Gene Description: | leucine rich melanocyte differentiation associated |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
