Difference between revisions of "TSS:Hg 106081.1"
From referenceTSS
| Line 2: | Line 2: | ||
|AMSH-FP= | |AMSH-FP= | ||
|AMSH-LP= | |AMSH-LP= | ||
| − | |all_trans=BC010846:-160 AK056086:-171 | + | |all_trans=BC010846:-160 AK056086:-171 ENST00000371926.8:-184 NM_020799:-184 ENST00000461650.1:-205 |
|bA399O19.2= | |bA399O19.2= | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
|distance=-160 | |distance=-160 | ||
| − | |distance_to_tss= | + | |distance_to_tss=232 |
|end=88880525 | |end=88880525 | ||
|end_of_center_position=88880477 | |end_of_center_position=88880477 | ||
|entrez_id=57559 | |entrez_id=57559 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
| − | |gene_alias=ALMalpha | + | |gene_alias=ALMalpha{{!}}AMSH-FP{{!}}AMSH-LP{{!}}bA399O19.2 |
|gene_description=STAM binding protein like 1 | |gene_description=STAM binding protein like 1 | ||
|gene_id=57559 | |gene_id=57559 | ||
Revision as of 18:29, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 88880476 |
|---|---|
| End of the center position in the TSS region: | 88880477 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC010846 |
|---|---|
| Distance: | -160 |
| Num_trans: | 5 |
| All_trans: | BC010846:-160 AK056086:-171 ENST00000371926.8:-184 NM_020799:-184 ENST00000461650.1:-205 |
TATA-Box annotation
| Distance to TSS: | 232 |
|---|---|
| Nearest PromoterID: | NM_020799 |
| Entrez ID: | 57559 |
| Nearest Unigene: | Hs.16229 |
| Nearest Refseq: | NM_020799 |
| Nearest Ensembl: | ENSG00000138134 |
| Gene Name: | STAM binding protein like 1 |
| Gene Alias: | ALMalpha|AMSH-FP|AMSH-LP|bA399O19.2 |
| Gene Description: | STAM binding protein like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
