Difference between revisions of "TSS:Hg 106095.1"
From referenceTSS
| Line 6: | Line 6: | ||
|FASTM= | |FASTM= | ||
|TNFRSF6= | |TNFRSF6= | ||
| − | |all_trans=ENST00000484444.5 | + | |all_trans=ENST00000484444.5:0 ENST00000352159.8:-14 AY495076:-18 EU481974:-18 M67454:-18 ENST00000357339.6:43 X63717:-44 ENST00000652046.1:63 NR_028036:63 NM_000043:63 NR_028034:63 NR_028033:63 NM_001320619:63 NM_152872:63 NM_152871:63 NR_028035:63 NR_135313:63 AK290978:-70 ENST00000488877.5:117 ENST00000494410.5:117 ENST00000479522.5:117 X83490:117 X83491:117 X83492:117 X83493:117 ENST00000612663.5:-119 BC012479:-134 DQ894675:139 KJ890693:141 KR709616:141 KR709617:141 KR709618:141 KR709619:141 ENST00000492756.5:142 ENST00000355279.2:142 X89101:142 CR450307:142 FJ200481:142 FJ373045:142 FJ373046:142 FM246457:142 FM246458:142 FM246459:142 Z47993:142 Z47994:142 Z47995:142 Z66556:142 Z70519:142 Z70520:142 ENST00000355740.7:-170 KJ958564:-170 KM114217:-170 ENST00000460510.5:225 ENST00000477270.5:285 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-80 |
|end=88990735 | |end=88990735 | ||
|end_of_center_position=88990718 | |end_of_center_position=88990718 | ||
|entrez_id=355 | |entrez_id=355 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=ALPS1A | + | |gene_alias=ALPS1A{{!}}APO-1{{!}}APT1{{!}}CD95{{!}}FAS1{{!}}FASTM{{!}}TNFRSF6 |
|gene_description=Fas cell surface death receptor | |gene_description=Fas cell surface death receptor | ||
|gene_id=355 | |gene_id=355 | ||
| Line 25: | Line 25: | ||
|hgnc_mgi_id=HGNC:11920 | |hgnc_mgi_id=HGNC:11920 | ||
|nearest_ensembl=ENSG00000026103 | |nearest_ensembl=ENSG00000026103 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_028035 |
|nearest_refseq=NM_000043 | |nearest_refseq=NM_000043 | ||
|nearest_unigene=Hs.244139 | |nearest_unigene=Hs.244139 | ||
| − | |num_trans= | + | |num_trans=54 |
|species=human | |species=human | ||
|start=88990700 | |start=88990700 | ||
|start_of_center_position=88990717 | |start_of_center_position=88990717 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000484444.5 | + | |transcript_name=ENST00000484444.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106095.1 | |tss_id=hg_106095.1 | ||
Revision as of 18:29, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 88990717 |
|---|---|
| End of the center position in the TSS region: | 88990718 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000484444.5 |
|---|---|
| Distance: | 0 |
| Num_trans: | 54 |
| All_trans: | ENST00000484444.5:0 ENST00000352159.8:-14 AY495076:-18 EU481974:-18 M67454:-18 ENST00000357339.6:43 X63717:-44 ENST00000652046.1:63 NR_028036:63 NM_000043:63 NR_028034:63 NR_028033:63 NM_001320619:63 NM_152872:63 NM_152871:63 NR_028035:63 NR_135313:63 AK290978:-70 ENST00000488877.5:117 ENST00000494410.5:117 ENST00000479522.5:117 X83490:117 X83491:117 X83492:117 X83493:117 ENST00000612663.5:-119 BC012479:-134 DQ894675:139 KJ890693:141 KR709616:141 KR709617:141 KR709618:141 KR709619:141 ENST00000492756.5:142 ENST00000355279.2:142 X89101:142 CR450307:142 FJ200481:142 FJ373045:142 FJ373046:142 FM246457:142 FM246458:142 FM246459:142 Z47993:142 Z47994:142 Z47995:142 Z66556:142 Z70519:142 Z70520:142 ENST00000355740.7:-170 KJ958564:-170 KM114217:-170 ENST00000460510.5:225 ENST00000477270.5:285 |
TATA-Box annotation
| Distance to TSS: | -80 |
|---|---|
| Nearest PromoterID: | NR_028035 |
| Entrez ID: | 355 |
| Nearest Unigene: | Hs.244139 |
| Nearest Refseq: | NM_000043 |
| Nearest Ensembl: | ENSG00000026103 |
| Gene Name: | Fas cell surface death receptor |
| Gene Alias: | ALPS1A|APO-1|APT1|CD95|FAS1|FASTM|TNFRSF6 |
| Gene Description: | Fas cell surface death receptor |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
