Difference between revisions of "TSS:Hg 106120.1"
From referenceTSS
| Line 12: | Line 12: | ||
|cig42= | |cig42= | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=5038 |
|end=89307088 | |end=89307088 | ||
|end_of_center_position=89307084 | |end_of_center_position=89307084 | ||
|entrez_id=3433 | |entrez_id=3433 | ||
|gc_percent=0.41791 | |gc_percent=0.41791 | ||
| − | |gene_alias=G10P2 | + | |gene_alias=G10P2{{!}}GARG-39{{!}}IFI-54{{!}}IFI-54K{{!}}IFI54{{!}}IFIT-2{{!}}ISG-54 K{{!}}ISG-54K{{!}}ISG54{{!}}P54{{!}}cig42 |
|gene_description=interferon induced protein with tetratricopeptide repeats 2 | |gene_description=interferon induced protein with tetratricopeptide repeats 2 | ||
|gene_name=IFIT2 | |gene_name=IFIT2 | ||
| Line 31: | Line 31: | ||
|start_of_center_position=89307083 | |start_of_center_position=89307083 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=54(CTTTATAGAGGG,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 18:30, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 89307083 |
|---|---|
| End of the center position in the TSS region: | 89307084 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 5038 |
|---|---|
| Nearest PromoterID: | NM_001547 |
| Entrez ID: | 3433 |
| Nearest Unigene: | Hs.437609 |
| Nearest Refseq: | NM_001547 |
| Nearest Ensembl: | ENSG00000119922 |
| Gene Name: | IFIT2 |
| Gene Alias: | G10P2|GARG-39|IFI-54|IFI-54K|IFI54|IFIT-2|ISG-54 K|ISG-54K|ISG54|P54|cig42 |
| Gene Description: | interferon induced protein with tetratricopeptide repeats 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.41791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 54(CTTTATAGAGGG,+,0.00) |
