Difference between revisions of "TSS:Hg 106207.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BC051845:-352 BC007377:-371 ENST00000614189.4 | + | |all_trans=BC051845:-352 BC007377:-371 ENST00000614189.4:-377 NR_046435:-377 NM_001257101:-377 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:28264 | |hgnc_mgi_id=HGNC:28264 | ||
|nearest_ensembl=ENSG00000180628 | |nearest_ensembl=ENSG00000180628 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_046435 |
|nearest_refseq=NM_032373 | |nearest_refseq=NM_032373 | ||
|nearest_unigene=Hs.500512 | |nearest_unigene=Hs.500512 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=human | |species=human | ||
|start=91163388 | |start=91163388 | ||
Revision as of 18:32, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 91163389 |
|---|---|
| End of the center position in the TSS region: | 91163390 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC051845 |
|---|---|
| Distance: | -352 |
| Num_trans: | 5 |
| All_trans: | BC051845:-352 BC007377:-371 ENST00000614189.4:-377 NR_046435:-377 NM_001257101:-377 |
TATA-Box annotation
| Distance to TSS: | 377 |
|---|---|
| Nearest PromoterID: | NR_046435 |
| Entrez ID: | 84333 |
| Nearest Unigene: | Hs.500512 |
| Nearest Refseq: | NM_032373 |
| Nearest Ensembl: | ENSG00000180628 |
| Gene Name: | polycomb group ring finger 5 |
| Gene Alias: | RNF159 |
| Gene Description: | polycomb group ring finger 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
