Difference between revisions of "TSS:Hg 106266.1"
From referenceTSS
| Line 5: | Line 5: | ||
|SEC15L3= | |SEC15L3= | ||
|Sec15p= | |Sec15p= | ||
| − | |all_trans=ENST00000443748.6 | + | |all_trans=ENST00000443748.6:0 AK293857:0 ENST00000371543.5:1 AF220217:1 NM_001319200:-7 AL832501:28 EF571007:31 ENST00000260762.10:36 NM_019053:36 NM_001319195:36 AK315544:36 BC028395:36 CU688490:50 EU832839:50 KJ898998:50 GQ129240:50 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
| Line 14: | Line 14: | ||
|entrez_id=54536 | |entrez_id=54536 | ||
|gc_percent=0.781095 | |gc_percent=0.781095 | ||
| − | |gene_alias=EXOC6A | + | |gene_alias=EXOC6A{{!}}SEC15{{!}}SEC15L{{!}}SEC15L1{{!}}SEC15L3{{!}}Sec15p |
|gene_description=exocyst complex component 6 | |gene_description=exocyst complex component 6 | ||
|gene_id=54536 | |gene_id=54536 | ||
| Line 24: | Line 24: | ||
|hgnc_mgi_id=HGNC:23196 | |hgnc_mgi_id=HGNC:23196 | ||
|nearest_ensembl=ENSG00000138190 | |nearest_ensembl=ENSG00000138190 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001319200 |
|nearest_refseq=NM_019053 | |nearest_refseq=NM_019053 | ||
|nearest_unigene=Hs.655657 | |nearest_unigene=Hs.655657 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=92848461 | |start=92848461 | ||
|start_of_center_position=92848472 | |start_of_center_position=92848472 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000443748.6 | + | |transcript_name=ENST00000443748.6 AK293857 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106266.1 | |tss_id=hg_106266.1 | ||
Revision as of 18:33, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 92848472 |
|---|---|
| End of the center position in the TSS region: | 92848473 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000443748.6 AK293857 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | ENST00000443748.6:0 AK293857:0 ENST00000371543.5:1 AF220217:1 NM_001319200:-7 AL832501:28 EF571007:31 ENST00000260762.10:36 NM_019053:36 NM_001319195:36 AK315544:36 BC028395:36 CU688490:50 EU832839:50 KJ898998:50 GQ129240:50 |
TATA-Box annotation
| Distance to TSS: | 18 |
|---|---|
| Nearest PromoterID: | NM_001319200 |
| Entrez ID: | 54536 |
| Nearest Unigene: | Hs.655657 |
| Nearest Refseq: | NM_019053 |
| Nearest Ensembl: | ENSG00000138190 |
| Gene Name: | exocyst complex component 6 |
| Gene Alias: | EXOC6A|SEC15|SEC15L|SEC15L1|SEC15L3|Sec15p |
| Gene Description: | exocyst complex component 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.781095 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
