Difference between revisions of "TSS:Hg 106267.1"
From referenceTSS
| Line 5: | Line 5: | ||
|SEC15L3= | |SEC15L3= | ||
|Sec15p= | |Sec15p= | ||
| − | |all_trans=ENST00000260762.10:0 | + | |all_trans=ENST00000260762.10:0 NM_019053:0 NM_001319195:0 AL832501:0 EF571007:0 AK315544:0 BC028395:0 CU688490:0 EU832839:0 KJ898998:0 GQ129240:0 ENST00000371543.5:-4 AF220217:-4 ENST00000443748.6:-21 AK293857:-21 NM_001319200:-34 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-8 |
|end=92848535 | |end=92848535 | ||
|end_of_center_position=92848512 | |end_of_center_position=92848512 | ||
|entrez_id=54536 | |entrez_id=54536 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
| − | |gene_alias=EXOC6A | + | |gene_alias=EXOC6A{{!}}SEC15{{!}}SEC15L{{!}}SEC15L1{{!}}SEC15L3{{!}}Sec15p |
|gene_description=exocyst complex component 6 | |gene_description=exocyst complex component 6 | ||
|gene_id=54536 | |gene_id=54536 | ||
| Line 24: | Line 24: | ||
|hgnc_mgi_id=HGNC:23196 | |hgnc_mgi_id=HGNC:23196 | ||
|nearest_ensembl=ENSG00000138190 | |nearest_ensembl=ENSG00000138190 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_019053 |
|nearest_refseq=NM_019053 | |nearest_refseq=NM_019053 | ||
|nearest_unigene=Hs.655657 | |nearest_unigene=Hs.655657 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=92848488 | |start=92848488 | ||
|start_of_center_position=92848511 | |start_of_center_position=92848511 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000260762.10 | + | |transcript_name=ENST00000260762.10 NM_019053 NM_001319195 AL832501 EF571007 AK315544 BC028395 CU688490 EU832839 KJ898998 GQ129240 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106267.1 | |tss_id=hg_106267.1 | ||
Revision as of 18:33, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 92848511 |
|---|---|
| End of the center position in the TSS region: | 92848512 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000260762.10 NM_019053 NM_001319195 AL832501 EF571007 AK315544 BC028395 CU688490 EU832839 KJ898998 GQ129240 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | ENST00000260762.10:0 NM_019053:0 NM_001319195:0 AL832501:0 EF571007:0 AK315544:0 BC028395:0 CU688490:0 EU832839:0 KJ898998:0 GQ129240:0 ENST00000371543.5:-4 AF220217:-4 ENST00000443748.6:-21 AK293857:-21 NM_001319200:-34 |
TATA-Box annotation
| Distance to TSS: | -8 |
|---|---|
| Nearest PromoterID: | NM_019053 |
| Entrez ID: | 54536 |
| Nearest Unigene: | Hs.655657 |
| Nearest Refseq: | NM_019053 |
| Nearest Ensembl: | ENSG00000138190 |
| Gene Name: | exocyst complex component 6 |
| Gene Alias: | EXOC6A|SEC15|SEC15L|SEC15L1|SEC15L3|Sec15p |
| Gene Description: | exocyst complex component 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
