Difference between revisions of "TSS:Hg 106271.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000624358.3 | + | |all_trans=ENST00000651965.1:0 NM_183374:0 ENST00000624358.3:4 AK131099:4 BC169250:452 AY356349:460 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=2 |
|end=93060804 | |end=93060804 | ||
|end_of_center_position=93060800 | |end_of_center_position=93060800 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_183374 | |nearest_refseq=NM_183374 | ||
|nearest_unigene=Hs.369993 | |nearest_unigene=Hs.369993 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=93060795 | |start=93060795 | ||
|start_of_center_position=93060799 | |start_of_center_position=93060799 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-34(ATCTATATAAAC,-,0.00) |
| − | |transcript_name= | + | |transcript_name=ENST00000651965.1 NM_183374 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106271.1 | |tss_id=hg_106271.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q6V0L0 |
}} | }} | ||
Revision as of 18:34, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 93060799 |
|---|---|
| End of the center position in the TSS region: | 93060800 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000651965.1 NM_183374 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENST00000651965.1:0 NM_183374:0 ENST00000624358.3:4 AK131099:4 BC169250:452 AY356349:460 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_183374 |
| Entrez ID: | 340665 |
| Nearest Unigene: | Hs.369993 |
| Nearest Refseq: | NM_183374 |
| Nearest Ensembl: | ENSG00000187553 |
| Gene Name: | cytochrome P450 family 26 subfamily C member 1 |
| Gene Alias: | FFDD4 |
| Gene Description: | cytochrome P450 family 26 subfamily C member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(ATCTATATAAAC,-,0.00) |
