Difference between revisions of "TSS:Hg 106274.1"
From referenceTSS
| Line 3: | Line 3: | ||
|P450RAI= | |P450RAI= | ||
|P450RAI1= | |P450RAI1= | ||
| − | |all_trans=ENST00000224356. | + | |all_trans=ENST00000224356.5:0 NM_000783:0 AK075374:0 AF005418:12 BC156283:35 BC157063:35 LF213442:177 MA449019:177 ENST00000622925.1:180 ENST00000371531.5:-411 NM_057157:-411 AK027560:-411 ENST00000624589.3:414 LF212780:-480 MA448357:-480 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-1 |
|end=93073898 | |end=93073898 | ||
|end_of_center_position=93073892 | |end_of_center_position=93073892 | ||
|entrez_id=1592 | |entrez_id=1592 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| − | |gene_alias=CP26 | + | |gene_alias=CP26{{!}}CYP26{{!}}P450RAI{{!}}P450RAI1 |
|gene_description=cytochrome P450 family 26 subfamily A member 1 | |gene_description=cytochrome P450 family 26 subfamily A member 1 | ||
|gene_id=1592 | |gene_id=1592 | ||
| Line 30: | Line 30: | ||
|start_of_center_position=93073891 | |start_of_center_position=93073891 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-33(GCCTATAAAGCG,+,0.00) |
| − | |transcript_name=ENST00000224356. | + | |transcript_name=ENST00000224356.5 NM_000783 AK075374 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106274.1 | |tss_id=hg_106274.1 | ||
Revision as of 18:34, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 93073891 |
|---|---|
| End of the center position in the TSS region: | 93073892 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000224356.5 NM_000783 AK075374 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | ENST00000224356.5:0 NM_000783:0 AK075374:0 AF005418:12 BC156283:35 BC157063:35 LF213442:177 MA449019:177 ENST00000622925.1:180 ENST00000371531.5:-411 NM_057157:-411 AK027560:-411 ENST00000624589.3:414 LF212780:-480 MA448357:-480 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_000783 |
| Entrez ID: | 1592 |
| Nearest Unigene: | Hs.150595 |
| Nearest Refseq: | NM_000783 |
| Nearest Ensembl: | ENSG00000095596 |
| Gene Name: | cytochrome P450 family 26 subfamily A member 1 |
| Gene Alias: | CP26|CYP26|P450RAI|P450RAI1 |
| Gene Description: | cytochrome P450 family 26 subfamily A member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -33(GCCTATAAAGCG,+,0.00) |
