Difference between revisions of "TSS:Hg 106346.1"
From referenceTSS
| Line 5: | Line 5: | ||
|P450C2C= | |P450C2C= | ||
|P450IIC19= | |P450IIC19= | ||
| − | |all_trans=ENST00000480405.2:14 | + | |all_trans=ENST00000480405.2:14 ENST00000371321.9:14 NM_000769:14 M61854:34 AB463557:39 BC111846:39 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 14: | Line 14: | ||
|entrez_id=1557 | |entrez_id=1557 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
| − | |gene_alias=CPCJ | + | |gene_alias=CPCJ{{!}}CYP2C{{!}}CYPIIC17{{!}}CYPIIC19{{!}}P450C2C{{!}}P450IIC19 |
|gene_description=cytochrome P450 family 2 subfamily C member 19 | |gene_description=cytochrome P450 family 2 subfamily C member 19 | ||
|gene_id=1557 | |gene_id=1557 | ||
| Line 27: | Line 27: | ||
|nearest_refseq=NM_000769 | |nearest_refseq=NM_000769 | ||
|nearest_unigene=Hs.282409 | |nearest_unigene=Hs.282409 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=94762656 | |start=94762656 | ||
|start_of_center_position=94762661 | |start_of_center_position=94762661 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-15(TGTTATAAAAAG,-,0.00) |
| − | |transcript_name=ENST00000480405.2 NM_000769 | + | |transcript_name=ENST00000480405.2 ENST00000371321.9 NM_000769 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106346.1 | |tss_id=hg_106346.1 | ||
Revision as of 18:35, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 94762661 |
|---|---|
| End of the center position in the TSS region: | 94762662 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000480405.2 ENST00000371321.9 NM_000769 |
|---|---|
| Distance: | 14 |
| Num_trans: | 6 |
| All_trans: | ENST00000480405.2:14 ENST00000371321.9:14 NM_000769:14 M61854:34 AB463557:39 BC111846:39 |
TATA-Box annotation
| Distance to TSS: | -19 |
|---|---|
| Nearest PromoterID: | NM_000769 |
| Entrez ID: | 1557 |
| Nearest Unigene: | Hs.282409 |
| Nearest Refseq: | NM_000769 |
| Nearest Ensembl: | ENSG00000165841 |
| Gene Name: | cytochrome P450 family 2 subfamily C member 19 |
| Gene Alias: | CPCJ|CYP2C|CYPIIC17|CYPIIC19|P450C2C|P450IIC19 |
| Gene Description: | cytochrome P450 family 2 subfamily C member 19 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -15(TGTTATAAAAAG,-,0.00) |
