Difference between revisions of "TSS:Hg 106385.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=AB046378:0 ENST00000630152.1:3 M11722:3 AK313615:13 M26144:27 ENST00000371174.5:28 NM_004088:28 NM_001017520:28 BC012920:49 AK223317:78 DQ891465:90 DQ894645:90 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-34 |
|end=96304406 | |end=96304406 | ||
|end_of_center_position=96304400 | |end_of_center_position=96304400 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:2983 | |hgnc_mgi_id=HGNC:2983 | ||
|nearest_ensembl=ENSG00000107447 | |nearest_ensembl=ENSG00000107447 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_004088 |
|nearest_refseq=NM_004088 | |nearest_refseq=NM_004088 | ||
|nearest_unigene=Hs.534206 | |nearest_unigene=Hs.534206 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=96304393 | |start=96304393 | ||
|start_of_center_position=96304399 | |start_of_center_position=96304399 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=AB046378 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106385.1 | |tss_id=hg_106385.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 18:36, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 96304399 |
|---|---|
| End of the center position in the TSS region: | 96304400 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AB046378 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | AB046378:0 ENST00000630152.1:3 M11722:3 AK313615:13 M26144:27 ENST00000371174.5:28 NM_004088:28 NM_001017520:28 BC012920:49 AK223317:78 DQ891465:90 DQ894645:90 |
TATA-Box annotation
| Distance to TSS: | -34 |
|---|---|
| Nearest PromoterID: | NM_004088 |
| Entrez ID: | 1791 |
| Nearest Unigene: | Hs.534206 |
| Nearest Refseq: | NM_004088 |
| Nearest Ensembl: | ENSG00000107447 |
| Gene Name: | DNA nucleotidylexotransferase |
| Gene Alias: | TDT |
| Gene Description: | DNA nucleotidylexotransferase |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
