Difference between revisions of "TSS:Hg 106572.1"
From referenceTSS
| Line 4: | Line 4: | ||
|NCRNA00263= | |NCRNA00263= | ||
|OLMALINCAS= | |OLMALINCAS= | ||
| − | |all_trans=AF113690:-125 | + | |all_trans=LF345749:81 MA581326:81 AF113690:-125 LF345748:-131 MA581325:-131 LF345750:263 MA581327:263 LF345747:-405 MA581324:-405 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=81 |
|distance_to_tss=-9687 | |distance_to_tss=-9687 | ||
|end=100363908 | |end=100363908 | ||
| Line 13: | Line 13: | ||
|entrez_id=90271 | |entrez_id=90271 | ||
|gc_percent=0.492537 | |gc_percent=0.492537 | ||
| − | |gene_alias=C10orf75 | + | |gene_alias=C10orf75{{!}}HI-LNC80{{!}}LINC00263{{!}}NCRNA00263{{!}}OLMALINCAS |
|gene_description=oligodendrocyte maturation-associated long intergenic non-coding RNA | |gene_description=oligodendrocyte maturation-associated long intergenic non-coding RNA | ||
|gene_name=OLMALINC | |gene_name=OLMALINC | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000235823 |
|nearest_promoter_id=NR_026762 | |nearest_promoter_id=NR_026762 | ||
|nearest_refseq=NR_026762 | |nearest_refseq=NR_026762 | ||
|nearest_unigene=Hs.628088 | |nearest_unigene=Hs.628088 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
|start=100363870 | |start=100363870 | ||
|start_of_center_position=100363889 | |start_of_center_position=100363889 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LF345749 MA581326 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_106572.1 | |tss_id=hg_106572.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Revision as of 18:40, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 100363889 |
|---|---|
| End of the center position in the TSS region: | 100363890 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF345749 MA581326 |
|---|---|
| Distance: | 81 |
| Num_trans: | 9 |
| All_trans: | LF345749:81 MA581326:81 AF113690:-125 LF345748:-131 MA581325:-131 LF345750:263 MA581327:263 LF345747:-405 MA581324:-405 |
TATA-Box annotation
| Distance to TSS: | -9687 |
|---|---|
| Nearest PromoterID: | NR_026762 |
| Entrez ID: | 90271 |
| Nearest Unigene: | Hs.628088 |
| Nearest Refseq: | NR_026762 |
| Nearest Ensembl: | ENSG00000235823 |
| Gene Name: | OLMALINC |
| Gene Alias: | C10orf75|HI-LNC80|LINC00263|NCRNA00263|OLMALINCAS |
| Gene Description: | oligodendrocyte maturation-associated long intergenic non-coding RNA |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
