Difference between revisions of "TSS:Hg 106699.1"
From referenceTSS
| Line 4: | Line 4: | ||
|LYT10= | |LYT10= | ||
|NF-kB2= | |NF-kB2= | ||
| − | |all_trans=NM_001077494:0 BC002844:0 | + | |all_trans=ENST00000369966.8:0 NM_001077494:0 BC002844:0 S76638:7 ENST00000601386.5:-380 ENST00000428099.6:-380 NM_001322935:-380 NM_001288724:-380 LF211354:-382 MA446931:-382 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| Line 13: | Line 13: | ||
|entrez_id=4791 | |entrez_id=4791 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
| − | |gene_alias=CVID10 | + | |gene_alias=CVID10{{!}}H2TF1{{!}}LYT-10{{!}}LYT10{{!}}NF-kB2{{!}}p100{{!}}p49/p100{{!}}p52 |
|gene_description=nuclear factor kappa B subunit 2 | |gene_description=nuclear factor kappa B subunit 2 | ||
|gene_id=4791 | |gene_id=4791 | ||
| − | |gene_name=nuclear factor | + | |gene_name=nuclear factor kappa B subunit 2 |
|gene_source=HGNC:7795 | |gene_source=HGNC:7795 | ||
|gene_symbol=NFKB2 | |gene_symbol=NFKB2 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_002502 | |nearest_refseq=NM_002502 | ||
|nearest_unigene=Hs.73090 | |nearest_unigene=Hs.73090 | ||
| − | |num_trans= | + | |num_trans=10 |
|p100= | |p100= | ||
|p49/p100= | |p49/p100= | ||
| Line 34: | Line 34: | ||
|start_of_center_position=102394539 | |start_of_center_position=102394539 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NM_001077494 BC002844 | + | |transcript_name=ENST00000369966.8 NM_001077494 BC002844 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106699.1 | |tss_id=hg_106699.1 | ||
Revision as of 18:43, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 102394539 |
|---|---|
| End of the center position in the TSS region: | 102394540 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000369966.8 NM_001077494 BC002844 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | ENST00000369966.8:0 NM_001077494:0 BC002844:0 S76638:7 ENST00000601386.5:-380 ENST00000428099.6:-380 NM_001322935:-380 NM_001288724:-380 LF211354:-382 MA446931:-382 |
TATA-Box annotation
| Distance to TSS: | -38 |
|---|---|
| Nearest PromoterID: | NM_001077494 |
| Entrez ID: | 4791 |
| Nearest Unigene: | Hs.73090 |
| Nearest Refseq: | NM_002502 |
| Nearest Ensembl: | ENSG00000077150 |
| Gene Name: | nuclear factor kappa B subunit 2 |
| Gene Alias: | CVID10|H2TF1|LYT-10|LYT10|NF-kB2|p100|p49/p100|p52 |
| Gene Description: | nuclear factor kappa B subunit 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
