Difference between revisions of "TSS:Hg 186408.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000426491.5:0 NR_040710:0 | + | |all_trans=ENST00000663466.1:0 ENST00000670580.1:0 ENST00000664172.1:0 ENST00000662559.1:0 ENST00000660550.1:0 ENST00000667042.1:0 ENST00000426491.5:0 ENST00000671453.1:0 NR_040710:0 AK124961:0 ENST00000658443.1:-9 ENST00000661614.1:-13 ENST00000666905.1:-13 ENST00000655307.1:-13 ENST00000605592.2:-15 ENST00000451151.6:-20 ENST00000656496.1:149 ENST00000603542.6:-243 BC107086:-243 |
|chr=chr20 | |chr=chr20 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_040710 | |nearest_refseq=NR_040710 | ||
|nearest_unigene=Hs.658178 | |nearest_unigene=Hs.658178 | ||
| − | |num_trans= | + | |num_trans=19 |
|species=human | |species=human | ||
|start=10219483 | |start=10219483 | ||
|start_of_center_position=10219497 | |start_of_center_position=10219497 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000426491.5 | + | |transcript_name=ENST00000663466.1 ENST00000670580.1 ENST00000664172.1 ENST00000662559.1 ENST00000660550.1 ENST00000667042.1 ENST00000426491.5 ENST00000671453.1 NR_040710 AK124961 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_186408.1 | |tss_id=hg_186408.1 | ||
Revision as of 01:26, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 10219497 |
|---|---|
| End of the center position in the TSS region: | 10219498 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000663466.1 ENST00000670580.1 ENST00000664172.1 ENST00000662559.1 ENST00000660550.1 ENST00000667042.1 ENST00000426491.5 ENST00000671453.1 NR_040710 AK124961 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | ENST00000663466.1:0 ENST00000670580.1:0 ENST00000664172.1:0 ENST00000662559.1:0 ENST00000660550.1:0 ENST00000667042.1:0 ENST00000426491.5:0 ENST00000671453.1:0 NR_040710:0 AK124961:0 ENST00000658443.1:-9 ENST00000661614.1:-13 ENST00000666905.1:-13 ENST00000655307.1:-13 ENST00000605592.2:-15 ENST00000451151.6:-20 ENST00000656496.1:149 ENST00000603542.6:-243 BC107086:-243 |
TATA-Box annotation
| Distance to TSS: | 9 |
|---|---|
| Nearest PromoterID: | NR_040710 |
| Entrez ID: | 100131208 |
| Nearest Unigene: | Hs.658178 |
| Nearest Refseq: | NR_040710 |
| Nearest Ensembl: | ENSG00000227906 |
| Gene Name: | SNAP25 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | SNAP25 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.08 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
