Difference between revisions of "TSS:Mm 99247.1"
From referenceTSS
Line 3: | Line 3: | ||
|Ppat= | |Ppat= | ||
|Ukr1= | |Ukr1= | ||
− | |all_trans=AF521095:0 BC064753:0 AK166894:-13 ENSMUST00000107308.3 | + | |all_trans=AF521095:0 BC064753:0 AK166894:-13 ENSMUST00000107308.3:-19 AK159912:-19 ENSMUST00000151056.7:-26 AK159405:-27 AK170330:-28 AK004878:-38 ENSMUST00000001806.9:-79 NM_001305982:-79 NR_155015:-79 LF198886:-80 MA434463:-80 BC156119:331 BC157111:331 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
Line 12: | Line 12: | ||
|entrez_id=71743 | |entrez_id=71743 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
− | |gene_alias=1300003G02Rik | + | |gene_alias=1300003G02Rik{{!}}Dpck{{!}}Ppat{{!}}Ukr1 |
|gene_description=Coenzyme A synthase | |gene_description=Coenzyme A synthase | ||
|gene_id=71743 | |gene_id=71743 | ||
Line 25: | Line 25: | ||
|nearest_refseq=NM_027896 | |nearest_refseq=NM_027896 | ||
|nearest_unigene=Mm.182271 | |nearest_unigene=Mm.182271 | ||
− | |num_trans= | + | |num_trans=16 |
|species=mouse | |species=mouse | ||
|start=101082643 | |start=101082643 |
Revision as of 03:47, 22 June 2021
Basic information about the TSS
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Start of the center position in the TSS region: | 101082660 |
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End of the center position in the TSS region: | 101082661 |
Gene and protein annotation
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Transcript annotation
Transcript_name: | AF521095 BC064753 |
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Distance: | 0 |
Num_trans: | 16 |
All_trans: | AF521095:0 BC064753:0 AK166894:-13 ENSMUST00000107308.3:-19 AK159912:-19 ENSMUST00000151056.7:-26 AK159405:-27 AK170330:-28 AK004878:-38 ENSMUST00000001806.9:-79 NM_001305982:-79 NR_155015:-79 LF198886:-80 MA434463:-80 BC156119:331 BC157111:331 |
TATA-Box annotation
Distance to TSS: | 96 |
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Nearest PromoterID: | NM_001305982 |
Entrez ID: | 71743 |
Nearest Unigene: | Mm.182271 |
Nearest Refseq: | NM_027896 |
Nearest Ensembl: | ENSMUSG00000001755 |
Gene Name: | Coenzyme A synthase |
Gene Alias: | 1300003G02Rik|Dpck|Ppat|Ukr1 |
Gene Description: | Coenzyme A synthase |
Gene Type: | protein-coding |
CpG%: | 0.065 |
GC%: | 0.616915 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |