Difference between revisions of "TSS:Hg 232139.1"
From referenceTSS
| Line 2: | Line 2: | ||
|PPAPDC1= | |PPAPDC1= | ||
|PPAPDC1A= | |PPAPDC1A= | ||
| − | |all_trans= | + | |all_trans=NM_001144916:-16 AK308621:-16 ENST00000491111.1:89 ENST00000369061.8:275 NM_001144914:275 NM_023029:275 NM_001144913:275 KP192323:341 KP192324:341 KP192325:341 KP192326:341 KP192327:341 KP192328:341 KP192329:341 KP192330:341 KP192331:341 ENST00000611527.1:355 ENST00000369056.5:401 X56191:401 ENST00000346997.6:413 ENST00000351936.10:413 Z71929:413 M55614:413 KJ896817:422 KR712030:422 KR712031:422 KR712032:422 KR712033:422 AB587574:423 AB084153:425 EF057068:425 AB821309:425 EU826598:425 EU826601:425 EU826599:425 EU826600:425 ENST00000613324.4:478 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| − | |distance= | + | |distance=-16 |
|distance_to_tss=-27 | |distance_to_tss=-27 | ||
|end=120456927 | |end=120456927 | ||
| Line 11: | Line 11: | ||
|entrez_id=196051 | |entrez_id=196051 | ||
|gc_percent=0.825871 | |gc_percent=0.825871 | ||
| − | |gene_alias=DPPL2 | + | |gene_alias=DPPL2{{!}}PPAPDC1{{!}}PPAPDC1A |
|gene_description=phospholipid phosphatase 4 | |gene_description=phospholipid phosphatase 4 | ||
| − | |gene_id= | + | |gene_id=2263 |
| − | |gene_name= | + | |gene_name=fibroblast growth factor receptor 2 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:3689 |
| − | |gene_symbol= | + | |gene_symbol=FGFR2 |
| − | |gene_synonyms= | + | |gene_synonyms=CD332 CEK3 ECT1 K-SAM TK14 TK25 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:3689 |
|nearest_ensembl=ENSG00000203805 | |nearest_ensembl=ENSG00000203805 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001318166 |
|nearest_refseq=NM_001030059 | |nearest_refseq=NM_001030059 | ||
|nearest_unigene=Hs.40479 | |nearest_unigene=Hs.40479 | ||
| − | |num_trans= | + | |num_trans=37 |
|species=human | |species=human | ||
|start=120456926 | |start=120456926 | ||
|start_of_center_position=121594241 | |start_of_center_position=121594241 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NM_001144916 AK308621 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_232139.1 | |tss_id=hg_232139.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=P21802 |
}} | }} | ||
Revision as of 12:17, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 121594241 |
|---|---|
| End of the center position in the TSS region: | 121594242 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001144916 AK308621 |
|---|---|
| Distance: | -16 |
| Num_trans: | 37 |
| All_trans: | NM_001144916:-16 AK308621:-16 ENST00000491111.1:89 ENST00000369061.8:275 NM_001144914:275 NM_023029:275 NM_001144913:275 KP192323:341 KP192324:341 KP192325:341 KP192326:341 KP192327:341 KP192328:341 KP192329:341 KP192330:341 KP192331:341 ENST00000611527.1:355 ENST00000369056.5:401 X56191:401 ENST00000346997.6:413 ENST00000351936.10:413 Z71929:413 M55614:413 KJ896817:422 KR712030:422 KR712031:422 KR712032:422 KR712033:422 AB587574:423 AB084153:425 EF057068:425 AB821309:425 EU826598:425 EU826601:425 EU826599:425 EU826600:425 ENST00000613324.4:478 |
TATA-Box annotation
| Distance to TSS: | -27 |
|---|---|
| Nearest PromoterID: | NM_001318166 |
| Entrez ID: | 196051 |
| Nearest Unigene: | Hs.40479 |
| Nearest Refseq: | NM_001030059 |
| Nearest Ensembl: | ENSG00000203805 |
| Gene Name: | fibroblast growth factor receptor 2 |
| Gene Alias: | DPPL2|PPAPDC1|PPAPDC1A |
| Gene Description: | phospholipid phosphatase 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.825871 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
