Difference between revisions of "TSS:Mm 54811.1"
From referenceTSS
| Line 2: | Line 2: | ||
|6530406I18Rik= | |6530406I18Rik= | ||
|AV277466= | |AV277466= | ||
| − | |all_trans=ENSMUST00000095974.3:0 AK163654:0 AK158869:0 AK047763:0 AK018206:0 AK018325:0 ENSMUST00000031891.14:-41 | + | |all_trans=ENSMUST00000095974.3:0 AK163654:0 AK158869:0 AK047763:0 AK018206:0 AK018325:0 ENSMUST00000031891.14:-41 NM_001113327:-41 NM_001286584:-41 NM_029528:-41 LF195443:-42 MA431020:-42 ENSMUST00000143278.7:-44 LF202631:-492 MA438208:-492 |
|chr=chr6 | |chr=chr6 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
| Line 11: | Line 11: | ||
|entrez_id=76156 | |entrez_id=76156 | ||
|gc_percent=0.830846 | |gc_percent=0.830846 | ||
| − | |gene_alias=6330503C03Rik | + | |gene_alias=6330503C03Rik{{!}}6530406I18Rik{{!}}AV277466 |
| − | |gene_description= | + | |gene_description=family with sequence similarity 131, member B |
|gene_id=76156 | |gene_id=76156 | ||
| − | |gene_name= | + | |gene_name=family with sequence similarity 131, member B |
|gene_source=MGI:1923406 | |gene_source=MGI:1923406 | ||
|gene_symbol=Fam131b | |gene_symbol=Fam131b | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=MGI:1923406 | |hgnc_mgi_id=MGI:1923406 | ||
|nearest_ensembl=ENSMUSG00000029861 | |nearest_ensembl=ENSMUSG00000029861 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001113327 |
|nearest_refseq=NM_029528 | |nearest_refseq=NM_029528 | ||
|nearest_unigene=Mm.234314 | |nearest_unigene=Mm.234314 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=mouse | |species=mouse | ||
|start=42324554 | |start=42324554 | ||
Revision as of 10:57, 21 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 42324576 |
|---|---|
| End of the center position in the TSS region: | 42324577 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000095974.3 AK163654 AK158869 AK047763 AK018206 AK018325 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | ENSMUST00000095974.3:0 AK163654:0 AK158869:0 AK047763:0 AK018206:0 AK018325:0 ENSMUST00000031891.14:-41 NM_001113327:-41 NM_001286584:-41 NM_029528:-41 LF195443:-42 MA431020:-42 ENSMUST00000143278.7:-44 LF202631:-492 MA438208:-492 |
TATA-Box annotation
| Distance to TSS: | 63 |
|---|---|
| Nearest PromoterID: | NM_001113327 |
| Entrez ID: | 76156 |
| Nearest Unigene: | Mm.234314 |
| Nearest Refseq: | NM_029528 |
| Nearest Ensembl: | ENSMUSG00000029861 |
| Gene Name: | family with sequence similarity 131, member B |
| Gene Alias: | 6330503C03Rik|6530406I18Rik|AV277466 |
| Gene Description: | family with sequence similarity 131, member B |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.830846 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
