Difference between revisions of "TSS:Mm 105187.1"
From referenceTSS
| Line 3: | Line 3: | ||
|T-DSP11= | |T-DSP11= | ||
|VHR= | |VHR= | ||
| − | |all_trans=ENSMUST00000176261.1:-10 AF280809:-15 AK170772:-29 AK008734:-29 ENSMUST00000143177.1:-37 NM_028207 | + | |all_trans=ENSMUST00000176261.1:-10 AF280809:-15 AK170772:-29 AK008734:-29 ENSMUST00000143177.1:-37 NM_028207:-50 ENSMUST00000003612.12:-58 BC016269:-58 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| Line 12: | Line 12: | ||
|entrez_id=72349 | |entrez_id=72349 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
| − | |gene_alias=2210015O03Rik | + | |gene_alias=2210015O03Rik{{!}}5031436O03Rik{{!}}T-DSP11{{!}}VHR |
|gene_description=dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related) | |gene_description=dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related) | ||
|gene_id=72349 | |gene_id=72349 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_028207 | |nearest_refseq=NM_028207 | ||
|nearest_unigene=Mm.196295 | |nearest_unigene=Mm.196295 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=mouse | |species=mouse | ||
|start=101984728 | |start=101984728 | ||
Revision as of 18:08, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 101984734 |
|---|---|
| End of the center position in the TSS region: | 101984735 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000176261.1 |
|---|---|
| Distance: | -10 |
| Num_trans: | 8 |
| All_trans: | ENSMUST00000176261.1:-10 AF280809:-15 AK170772:-29 AK008734:-29 ENSMUST00000143177.1:-37 NM_028207:-50 ENSMUST00000003612.12:-58 BC016269:-58 |
TATA-Box annotation
| Distance to TSS: | 56 |
|---|---|
| Nearest PromoterID: | NM_028207 |
| Entrez ID: | 72349 |
| Nearest Unigene: | Mm.196295 |
| Nearest Refseq: | NM_028207 |
| Nearest Ensembl: | ENSMUSG00000003518 |
| Gene Name: | dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related) |
| Gene Alias: | 2210015O03Rik|5031436O03Rik|T-DSP11|VHR |
| Gene Description: | dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related) |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
