Difference between revisions of "TSS:Hg 184505.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BT019426:2 AB002392:-24 U25033:-54 BC001768:-55 U25034:-56 AK312069:-64 | + | |all_trans=BT019426:2 AB002392:-24 U25033:-54 BC001768:-55 ENST00000649309.1:-56 U25034:-56 AK312069:-64 ENST00000649697.1:-66 ENST00000649451.1:-67 NM_005386:-67 NM_001322802:-67 NM_181689:-67 ENST00000647955.1:-76 LF205995:-105 MA441572:-105 ENST00000346199.3:-111 |
|chr=chr20 | |chr=chr20 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance=2 | |distance=2 | ||
| − | |distance_to_tss= | + | |distance_to_tss=73 |
|end=37521330 | |end=37521330 | ||
|end_of_center_position=37521324 | |end_of_center_position=37521324 | ||
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|hgnc_mgi_id=HGNC:7860 | |hgnc_mgi_id=HGNC:7860 | ||
|nearest_ensembl=ENSG00000053438 | |nearest_ensembl=ENSG00000053438 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_005386 |
|nearest_refseq=NM_005386 | |nearest_refseq=NM_005386 | ||
|nearest_unigene=Hs.504703 | |nearest_unigene=Hs.504703 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=37521316 | |start=37521316 | ||
Revision as of 00:42, 17 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 37521323 |
|---|---|
| End of the center position in the TSS region: | 37521324 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BT019426 |
|---|---|
| Distance: | 2 |
| Num_trans: | 16 |
| All_trans: | BT019426:2 AB002392:-24 U25033:-54 BC001768:-55 ENST00000649309.1:-56 U25034:-56 AK312069:-64 ENST00000649697.1:-66 ENST00000649451.1:-67 NM_005386:-67 NM_001322802:-67 NM_181689:-67 ENST00000647955.1:-76 LF205995:-105 MA441572:-105 ENST00000346199.3:-111 |
TATA-Box annotation
| Distance to TSS: | 73 |
|---|---|
| Nearest PromoterID: | NM_005386 |
| Entrez ID: | 4826 |
| Nearest Unigene: | Hs.504703 |
| Nearest Refseq: | NM_005386 |
| Nearest Ensembl: | ENSG00000053438 |
| Gene Name: | neuronatin |
| Gene Alias: | Peg5 |
| Gene Description: | neuronatin |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
