Difference between revisions of "TSS:Hg 184564.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000417318.3 | + | |all_trans=ENST00000417318.3:0 ENST00000489102.2:17 |
|chr=chr20 | |chr=chr20 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 9: | Line 9: | ||
|entrez_id=671 | |entrez_id=671 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
| − | |gene_alias=BPIFD1 | + | |gene_alias=BPIFD1{{!}}rBPI |
| − | |gene_description=bactericidal | + | |gene_description=bactericidal permeability increasing protein |
|gene_id=671 | |gene_id=671 | ||
| − | |gene_name=bactericidal | + | |gene_name=bactericidal permeability increasing protein |
|gene_source=HGNC:1095 | |gene_source=HGNC:1095 | ||
|gene_symbol=BPI | |gene_symbol=BPI | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001725 | |nearest_refseq=NM_001725 | ||
|nearest_unigene=Hs.529019 | |nearest_unigene=Hs.529019 | ||
| − | |num_trans= | + | |num_trans=2 |
|rBPI= | |rBPI= | ||
|species=human | |species=human | ||
| Line 28: | Line 28: | ||
|start_of_center_position=38317641 | |start_of_center_position=38317641 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-72(CCTTTTATGACC,+,0.00) |
| − | |transcript_name=ENST00000417318.3 | + | |transcript_name=ENST00000417318.3 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_184564.1 | |tss_id=hg_184564.1 | ||
Revision as of 00:43, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 38317641 |
|---|---|
| End of the center position in the TSS region: | 38317642 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000417318.3 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2 |
| All_trans: | ENST00000417318.3:0 ENST00000489102.2:17 |
TATA-Box annotation
| Distance to TSS: | 13491 |
|---|---|
| Nearest PromoterID: | NM_001725 |
| Entrez ID: | 671 |
| Nearest Unigene: | Hs.529019 |
| Nearest Refseq: | NM_001725 |
| Nearest Ensembl: | ENSG00000101425 |
| Gene Name: | bactericidal permeability increasing protein |
| Gene Alias: | BPIFD1|rBPI |
| Gene Description: | bactericidal permeability increasing protein |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -72(CCTTTTATGACC,+,0.00) |
