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Difference between revisions of "TSS:Hg 184792.1"

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Line 2: Line 2:
 
|SEMG=
 
|SEMG=
 
|SGI=
 
|SGI=
|all_trans=CU691118:-391 AB591040:-391 BT007177:-391 KJ901731:-391 KJ901732:-391 J04440:-397 BC055416:-406 BC011442:-408 BC005229:-412 BC007096:-412 AK291811:-412 ENST00000372781.3:-448 uc002xni.3:-448 NM_003007:-481
+
|all_trans=CU691118:-391 AB591040:-391 BT007177:-391 KJ901731:-391 KJ901732:-391 J04440:-397 BC055416:-406 BC011442:-408 ENST00000372781.4:-412 NM_003007:-412 BC005229:-412 BC007096:-412 AK291811:-412
 
|chr=chr20
 
|chr=chr20
 
|cpg_percent=0.015
 
|cpg_percent=0.015
 
|dJ172H20.2=
 
|dJ172H20.2=
 
|distance=-391
 
|distance=-391
|distance_to_tss=483
+
|distance_to_tss=414
 
|end=45207449
 
|end=45207449
 
|end_of_center_position=45207447
 
|end_of_center_position=45207447
 
|entrez_id=6406
 
|entrez_id=6406
 
|gc_percent=0.40796
 
|gc_percent=0.40796
|gene_alias=CT103
+
|gene_alias=CT103{{!}}SEMG{{!}}SGI{{!}}dJ172H20.2
|gene_description=semenogelin I
+
|gene_description=semenogelin 1
 
|gene_id=6406
 
|gene_id=6406
|gene_name=semenogelin I
+
|gene_name=semenogelin 1
 
|gene_source=HGNC:10742
 
|gene_source=HGNC:10742
 
|gene_symbol=SEMG1
 
|gene_symbol=SEMG1
Line 25: Line 25:
 
|nearest_refseq=NM_003007
 
|nearest_refseq=NM_003007
 
|nearest_unigene=Hs.1968
 
|nearest_unigene=Hs.1968
|num_trans=14
+
|num_trans=13
 
|species=human
 
|species=human
 
|start=45207444
 
|start=45207444

Revision as of 00:48, 17 June 2021

Basic information about the TSS


TSS ID:hg_184792.1
Species:human
Chr:chr20
TSS Classification:no
Start:45207444
End:45207449
Strand:+
TSS Score:1
Start of the center position in the TSS region:45207446
End of the center position in the TSS region:45207447



Gene and protein annotation


Transcript_name:CU691118 AB591040 BT007177 KJ901731 KJ901732
Distance:-391
GeneID:6406
HGNC/MGI_ID:HGNC:10742
UniProt_ID:
Gene_name:semenogelin 1
Gene_symbol:SEMG1
Gene_synonyms:CT103
Gene_source:HGNC:10742



Transcript annotation


Transcript_name:CU691118 AB591040 BT007177 KJ901731 KJ901732
Distance:-391
Num_trans:13
All_trans:CU691118:-391 AB591040:-391 BT007177:-391 KJ901731:-391 KJ901732:-391 J04440:-397 BC055416:-406 BC011442:-408 ENST00000372781.4:-412 NM_003007:-412 BC005229:-412 BC007096:-412 AK291811:-412



TATA-Box annotation


Distance to TSS:414
Nearest PromoterID:NM_003007
Entrez ID:6406
Nearest Unigene:Hs.1968
Nearest Refseq:NM_003007
Nearest Ensembl:ENSG00000124233
Gene Name:semenogelin 1
Gene Alias:CT103|SEMG|SGI|dJ172H20.2
Gene Description:semenogelin 1
Gene Type:protein-coding
CpG%:0.015
GC%:0.40796
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):