Difference between revisions of "TSS:Mm 99794.1"
From referenceTSS
| Line 2: | Line 2: | ||
|AI480719= | |AI480719= | ||
|P55= | |P55= | ||
| − | |all_trans=ENSMUST00000021063.12:0 ENSMUST00000106752.9:0 NM_025894 | + | |all_trans=ENSMUST00000021063.12:0 ENSMUST00000106752.9:0 NM_025894:0 AK007619:0 AK005114:0 AK152240:0 AK011806:0 AK150910:0 AK152041:0 AK160283:0 BC004694:0 AK017843:0 AK167236:0 AK009969:0 AK008646:0 AK151242:0 AK162779:0 LF198962:-7 MA434539:-7 AK007680:11 ENSMUST00000106750.4:33 LF231278:35 MA466855:35 AK211509:59 AK206379:83 LF231279:93 MA466856:93 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| Line 11: | Line 11: | ||
|entrez_id=66997 | |entrez_id=66997 | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
| − | |gene_alias=1500002F15Rik | + | |gene_alias=1500002F15Rik{{!}}AI480719{{!}}P55 |
| − | |gene_description= | + | |gene_description=proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 |
|gene_id=66997 | |gene_id=66997 | ||
| − | |gene_name= | + | |gene_name=proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 |
|gene_source=MGI:1914247 | |gene_source=MGI:1914247 | ||
|gene_symbol=Psmd12 | |gene_symbol=Psmd12 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_025894 | |nearest_refseq=NM_025894 | ||
|nearest_unigene=Mm.491171 | |nearest_unigene=Mm.491171 | ||
| − | |num_trans= | + | |num_trans=27 |
|species=mouse | |species=mouse | ||
|start=107479478 | |start=107479478 | ||
|start_of_center_position=107479511 | |start_of_center_position=107479511 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000021063.12 ENSMUST00000106752.9 NM_025894 | + | |transcript_name=ENSMUST00000021063.12 ENSMUST00000106752.9 NM_025894 AK007619 AK005114 AK152240 AK011806 AK150910 AK152041 AK160283 BC004694 AK017843 AK167236 AK009969 AK008646 AK151242 AK162779 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99794.1 | |tss_id=mm_99794.1 | ||
Revision as of 03:59, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 107479511 |
|---|---|
| End of the center position in the TSS region: | 107479512 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000021063.12 ENSMUST00000106752.9 NM_025894 AK007619 AK005114 AK152240 AK011806 AK150910 AK152041 AK160283 BC004694 AK017843 AK167236 AK009969 AK008646 AK151242 AK162779 |
|---|---|
| Distance: | 0 |
| Num_trans: | 27 |
| All_trans: | ENSMUST00000021063.12:0 ENSMUST00000106752.9:0 NM_025894:0 AK007619:0 AK005114:0 AK152240:0 AK011806:0 AK150910:0 AK152041:0 AK160283:0 BC004694:0 AK017843:0 AK167236:0 AK009969:0 AK008646:0 AK151242:0 AK162779:0 LF198962:-7 MA434539:-7 AK007680:11 ENSMUST00000106750.4:33 LF231278:35 MA466855:35 AK211509:59 AK206379:83 LF231279:93 MA466856:93 |
TATA-Box annotation
| Distance to TSS: | -17 |
|---|---|
| Nearest PromoterID: | NM_025894 |
| Entrez ID: | 66997 |
| Nearest Unigene: | Mm.491171 |
| Nearest Refseq: | NM_025894 |
| Nearest Ensembl: | ENSMUSG00000020720 |
| Gene Name: | proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 |
| Gene Alias: | 1500002F15Rik|AI480719|P55 |
| Gene Description: | proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
