Difference between revisions of "TSS:Mm 99815.1"
From referenceTSS
| Line 6: | Line 6: | ||
|Ccdc46= | |Ccdc46= | ||
|Macoco= | |Macoco= | ||
| − | |all_trans=ENSMUST00000061287.11:0 ENSMUST00000143212.2:0 ENSMUST00000149683.8:0 NM_029606:0 | + | |all_trans=ENSMUST00000061287.11:0 ENSMUST00000143212.2:0 ENSMUST00000149683.8:0 NM_029606:0 NM_001373900:0 NM_001373899:0 AK160317:0 ENSMUST00000150863.8:-51 ENSMUST00000138538.8:157 ENSMUST00000130515.8:200 ENSMUST00000182729.7:308 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| Line 15: | Line 15: | ||
|entrez_id=76380 | |entrez_id=76380 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| − | |gene_alias=1700001M19Rik | + | |gene_alias=1700001M19Rik{{!}}1700029K01Rik{{!}}8430407H02Rik{{!}}AV043680{{!}}AV207351{{!}}Ccdc46{{!}}Macoco |
|gene_description=centrosomal protein 112 | |gene_description=centrosomal protein 112 | ||
|gene_id=76380 | |gene_id=76380 | ||
| Line 33: | Line 33: | ||
|start_of_center_position=108425273 | |start_of_center_position=108425273 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000061287.11 ENSMUST00000143212.2 ENSMUST00000149683.8 NM_029606 | + | |transcript_name=ENSMUST00000061287.11 ENSMUST00000143212.2 ENSMUST00000149683.8 NM_029606 NM_001373900 NM_001373899 AK160317 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99815.1 | |tss_id=mm_99815.1 | ||
Revision as of 04:00, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 108425273 |
|---|---|
| End of the center position in the TSS region: | 108425274 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000061287.11 ENSMUST00000143212.2 ENSMUST00000149683.8 NM_029606 NM_001373900 NM_001373899 AK160317 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENSMUST00000061287.11:0 ENSMUST00000143212.2:0 ENSMUST00000149683.8:0 NM_029606:0 NM_001373900:0 NM_001373899:0 AK160317:0 ENSMUST00000150863.8:-51 ENSMUST00000138538.8:157 ENSMUST00000130515.8:200 ENSMUST00000182729.7:308 |
TATA-Box annotation
| Distance to TSS: | 7 |
|---|---|
| Nearest PromoterID: | NM_029606 |
| Entrez ID: | 76380 |
| Nearest Unigene: | Mm.344071 |
| Nearest Refseq: | NM_029586 |
| Nearest Ensembl: | ENSMUSG00000020728 |
| Gene Name: | centrosomal protein 112 |
| Gene Alias: | 1700001M19Rik|1700029K01Rik|8430407H02Rik|AV043680|AV207351|Ccdc46|Macoco |
| Gene Description: | centrosomal protein 112 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
