Difference between revisions of "TSS:Mm 99849.1"
From referenceTSS
| Line 2: | Line 2: | ||
|AU043124= | |AU043124= | ||
|Galpha13= | |Galpha13= | ||
| − | |all_trans=ENSMUST00000106702.3:0 ENSMUST00000020930.13:0 NM_010303:0 | + | |all_trans=ENSMUST00000106702.3:0 ENSMUST00000020930.13:0 NM_010303:0 NM_001359034:0 AK011851:0 M63660:0 AK149766:50 BC057665:86 BC049898:226 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-18 |
|end=109362854 | |end=109362854 | ||
|end_of_center_position=109362813 | |end_of_center_position=109362813 | ||
|entrez_id=14674 | |entrez_id=14674 | ||
|gc_percent=0.825871 | |gc_percent=0.825871 | ||
| − | |gene_alias=AU024132 | + | |gene_alias=AU024132{{!}}AU043124{{!}}Galpha13 |
| − | |gene_description= | + | |gene_description=guanine nucleotide binding protein, alpha 13 |
|gene_id=14674 | |gene_id=14674 | ||
| − | |gene_name= | + | |gene_name=guanine nucleotide binding protein, alpha 13 |
|gene_source=MGI:95768 | |gene_source=MGI:95768 | ||
|gene_symbol=Gna13 | |gene_symbol=Gna13 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=MGI:95768 | |hgnc_mgi_id=MGI:95768 | ||
|nearest_ensembl=ENSMUSG00000020611 | |nearest_ensembl=ENSMUSG00000020611 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001359034 |
|nearest_refseq=NM_010303 | |nearest_refseq=NM_010303 | ||
|nearest_unigene=Mm.193925 | |nearest_unigene=Mm.193925 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=mouse | |species=mouse | ||
|start=109362771 | |start=109362771 | ||
|start_of_center_position=109362812 | |start_of_center_position=109362812 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000106702.3 ENSMUST00000020930.13 NM_010303 | + | |transcript_name=ENSMUST00000106702.3 ENSMUST00000020930.13 NM_010303 NM_001359034 AK011851 M63660 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99849.1 | |tss_id=mm_99849.1 | ||
Revision as of 04:00, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 109362812 |
|---|---|
| End of the center position in the TSS region: | 109362813 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000106702.3 ENSMUST00000020930.13 NM_010303 NM_001359034 AK011851 M63660 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENSMUST00000106702.3:0 ENSMUST00000020930.13:0 NM_010303:0 NM_001359034:0 AK011851:0 M63660:0 AK149766:50 BC057665:86 BC049898:226 |
TATA-Box annotation
| Distance to TSS: | -18 |
|---|---|
| Nearest PromoterID: | NM_001359034 |
| Entrez ID: | 14674 |
| Nearest Unigene: | Mm.193925 |
| Nearest Refseq: | NM_010303 |
| Nearest Ensembl: | ENSMUSG00000020611 |
| Gene Name: | guanine nucleotide binding protein, alpha 13 |
| Gene Alias: | AU024132|AU043124|Galpha13 |
| Gene Description: | guanine nucleotide binding protein, alpha 13 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.825871 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
