Difference between revisions of "TSS:Mm 99877.1"
From referenceTSS
| Line 2: | Line 2: | ||
|ESTM12= | |ESTM12= | ||
|X83328= | |X83328= | ||
| − | |all_trans=ENSMUST00000092500.10:269 NM_025275 | + | |all_trans=ENSMUST00000092500.10:269 NM_025275:269 ENSMUST00000020929.16:299 AK077195:299 ENSMUST00000125108.1:305 AK143908:305 AK004062:310 AK075748:329 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 11: | Line 11: | ||
|entrez_id=13929 | |entrez_id=13929 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
| − | |gene_alias=AA408420 | + | |gene_alias=AA408420{{!}}ESTM12{{!}}X83328 |
|gene_description=archaelysin family metallopeptidase 2 | |gene_description=archaelysin family metallopeptidase 2 | ||
|gene_id=13929 | |gene_id=13929 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_025275 | |nearest_refseq=NM_025275 | ||
|nearest_unigene=Mm.211850 | |nearest_unigene=Mm.211850 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=mouse | |species=mouse | ||
|start=109425664 | |start=109425664 | ||
|start_of_center_position=109425670 | |start_of_center_position=109425670 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000092500.10 NM_025275 | + | |transcript_name=ENSMUST00000092500.10 NM_025275 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_99877.1 | |tss_id=mm_99877.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=B1AT59 | + | |uniprot_id=B1AT59 Q400C8 |
}} | }} | ||
Revision as of 04:01, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 109425670 |
|---|---|
| End of the center position in the TSS region: | 109425671 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000092500.10 NM_025275 |
|---|---|
| Distance: | 269 |
| Num_trans: | 8 |
| All_trans: | ENSMUST00000092500.10:269 NM_025275:269 ENSMUST00000020929.16:299 AK077195:299 ENSMUST00000125108.1:305 AK143908:305 AK004062:310 AK075748:329 |
TATA-Box annotation
| Distance to TSS: | -275 |
|---|---|
| Nearest PromoterID: | NM_025275 |
| Entrez ID: | 13929 |
| Nearest Unigene: | Mm.211850 |
| Nearest Refseq: | NM_025275 |
| Nearest Ensembl: | ENSMUSG00000020610 |
| Gene Name: | archaelysin family metallopeptidase 2 |
| Gene Alias: | AA408420|ESTM12|X83328 |
| Gene Description: | archaelysin family metallopeptidase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
