Difference between revisions of "TSS:Hg 187457.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000651288.1:0 ENST00000409554.1:-56 ENST00000504988.1:224 AK311906:226 ENST00000354280.9:249 NM_001198986:249 NM_020398:249 NM_001302861:249 AK301937:249 BC003675:249 GQ891395:261 BC044829:261 BC053369:266 AL118493:270 AF286370:272 AF286368:272 CU690968:292 HQ448506:292 KJ894392:292 ENST00000496898.1:293 AK126022:293 |
|chr=chr20 | |chr=chr20 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss=- | + | |distance_to_tss=-272 |
|end=45547696 | |end=45547696 | ||
|end_of_center_position=45547673 | |end_of_center_position=45547673 | ||
| − | |entrez_id= | + | |entrez_id=57119 |
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
| − | |gene_alias=SPINLW1 | + | |gene_alias=CT71{{!}}CT72{{!}}SPINLW1{{!}}WAP7{{!}}WFDC7{{!}}dJ461P17.2 |
| − | |gene_description= | + | |gene_description=epididymal peptidase inhibitor |
| − | |gene_id= | + | |gene_id=100526773 |
| − | |gene_name= | + | |gene_name=EPPIN-WFDC6 readthrough |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:38825 |
| − | |gene_symbol=EPPIN | + | |gene_symbol=EPPIN-WFDC6 |
| − | |gene_synonyms= | + | |gene_synonyms= |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:38825 |
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000101448 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_020398 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_020398 |
|nearest_unigene=Hs.121084 | |nearest_unigene=Hs.121084 | ||
| − | |num_trans= | + | |num_trans=21 |
|species=human | |species=human | ||
|start=45547649 | |start=45547649 | ||
|start_of_center_position=45547672 | |start_of_center_position=45547672 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000651288.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_187457.1 | |tss_id=hg_187457.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A494C0M2 |
}} | }} | ||
Revision as of 01:50, 17 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 45547672 |
|---|---|
| End of the center position in the TSS region: | 45547673 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000651288.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 21 |
| All_trans: | ENST00000651288.1:0 ENST00000409554.1:-56 ENST00000504988.1:224 AK311906:226 ENST00000354280.9:249 NM_001198986:249 NM_020398:249 NM_001302861:249 AK301937:249 BC003675:249 GQ891395:261 BC044829:261 BC053369:266 AL118493:270 AF286370:272 AF286368:272 CU690968:292 HQ448506:292 KJ894392:292 ENST00000496898.1:293 AK126022:293 |
TATA-Box annotation
| Distance to TSS: | -272 |
|---|---|
| Nearest PromoterID: | NM_020398 |
| Entrez ID: | 57119 |
| Nearest Unigene: | Hs.121084 |
| Nearest Refseq: | NM_020398 |
| Nearest Ensembl: | ENSG00000101448 |
| Gene Name: | EPPIN-WFDC6 readthrough |
| Gene Alias: | CT71|CT72|SPINLW1|WAP7|WFDC7|dJ461P17.2 |
| Gene Description: | epididymal peptidase inhibitor |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
