Difference between revisions of "TSS:Mm 99910.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000143247.1:40 NR_045909 | + | |all_trans=ENSMUST00000143247.1:40 NR_045909:40 AK006264:40 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_045909 | |nearest_refseq=NR_045909 | ||
|nearest_unigene=Mm.250442 | |nearest_unigene=Mm.250442 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=mouse | |species=mouse | ||
|start=109845828 | |start=109845828 | ||
|start_of_center_position=109845833 | |start_of_center_position=109845833 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000143247.1 NR_045909 | + | |transcript_name=ENSMUST00000143247.1 NR_045909 AK006264 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_99910.1 | |tss_id=mm_99910.1 | ||
Revision as of 04:02, 22 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 109845833 |
|---|---|
| End of the center position in the TSS region: | 109845834 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000143247.1 NR_045909 AK006264 |
|---|---|
| Distance: | 40 |
| Num_trans: | 3 |
| All_trans: | ENSMUST00000143247.1:40 NR_045909:40 AK006264:40 |
TATA-Box annotation
| Distance to TSS: | -45 |
|---|---|
| Nearest PromoterID: | NR_045909 |
| Entrez ID: | 73257 |
| Nearest Unigene: | Mm.250442 |
| Nearest Refseq: | NR_045909 |
| Nearest Ensembl: | ENSMUSG00000087393 |
| Gene Name: | RIKEN cDNA 1700023C21 gene |
| Gene Alias: | - |
| Gene Description: | RIKEN cDNA 1700023C21 gene |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
