Difference between revisions of "TSS:Mm 99919.1"
From referenceTSS
| Line 3: | Line 3: | ||
|Prkmk6= | |Prkmk6= | ||
|SAPKK3= | |SAPKK3= | ||
| − | |all_trans=AK162671:0 | + | |all_trans=AK162671:0 AK141708:-23 AK140289:-25 AK077712:-34 ENSMUST00000020949.11:-40 ENSMUST00000100260.1:-40 AK053547:-40 AK138757:-40 AK043482:-40 AK086722:-40 NM_011943:-60 NM_001356353:-60 NM_001356352:-60 NM_001356345:-60 ENSMUST00000146084.7:86 U39066:86 X97052:91 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=65 |
|end=110399173 | |end=110399173 | ||
|end_of_center_position=110399168 | |end_of_center_position=110399168 | ||
|entrez_id=26399 | |entrez_id=26399 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
| − | |gene_alias=MEK6 | + | |gene_alias=MAPKK 6{{!}}MAPKK6{{!}}MEK6{{!}}MKK6{{!}}Prkmk6{{!}}SAPKK3 |
|gene_description=mitogen-activated protein kinase kinase 6 | |gene_description=mitogen-activated protein kinase kinase 6 | ||
|gene_id=26399 | |gene_id=26399 | ||
| Line 22: | Line 22: | ||
|hgnc_mgi_id=MGI:1346870 | |hgnc_mgi_id=MGI:1346870 | ||
|nearest_ensembl=ENSMUSG00000020623 | |nearest_ensembl=ENSMUSG00000020623 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001356352 |
|nearest_refseq=NM_011943 | |nearest_refseq=NM_011943 | ||
|nearest_unigene=Mm.14487 | |nearest_unigene=Mm.14487 | ||
Revision as of 04:02, 22 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 110399167 |
|---|---|
| End of the center position in the TSS region: | 110399168 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK162671 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | AK162671:0 AK141708:-23 AK140289:-25 AK077712:-34 ENSMUST00000020949.11:-40 ENSMUST00000100260.1:-40 AK053547:-40 AK138757:-40 AK043482:-40 AK086722:-40 NM_011943:-60 NM_001356353:-60 NM_001356352:-60 NM_001356345:-60 ENSMUST00000146084.7:86 U39066:86 X97052:91 |
TATA-Box annotation
| Distance to TSS: | 65 |
|---|---|
| Nearest PromoterID: | NM_001356352 |
| Entrez ID: | 26399 |
| Nearest Unigene: | Mm.14487 |
| Nearest Refseq: | NM_011943 |
| Nearest Ensembl: | ENSMUSG00000020623 |
| Gene Name: | mitogen-activated protein kinase kinase 6 |
| Gene Alias: | MAPKK 6|MAPKK6|MEK6|MKK6|Prkmk6|SAPKK3 |
| Gene Description: | mitogen-activated protein kinase kinase 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
