Difference between revisions of "TSS:Mm 99957.1"
From referenceTSS
| Line 4: | Line 4: | ||
|Smstr-2= | |Smstr-2= | ||
|Smstr2= | |Smstr2= | ||
| − | |all_trans=ENSMUST00000146390.2:0 ENSMUST00000106630.1:130 | + | |all_trans=ENSMUST00000146390.2:0 NM_001042606:0 NM_009217:0 ENSMUST00000106630.1:130 X68951:135 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=5 |
|end=113619346 | |end=113619346 | ||
|end_of_center_position=113619333 | |end_of_center_position=113619333 | ||
|entrez_id=20606 | |entrez_id=20606 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| − | |gene_alias=SRIF-1 | + | |gene_alias=SRIF-1{{!}}SS2R{{!}}SSTR-2{{!}}Smstr-2{{!}}Smstr2{{!}}sst2 |
|gene_description=somatostatin receptor 2 | |gene_description=somatostatin receptor 2 | ||
|gene_id=20606 | |gene_id=20606 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_009217 | |nearest_refseq=NM_009217 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=5 |
|species=mouse | |species=mouse | ||
|sst2= | |sst2= | ||
| Line 32: | Line 32: | ||
|start_of_center_position=113619332 | |start_of_center_position=113619332 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000146390.2 | + | |transcript_name=ENSMUST00000146390.2 NM_001042606 NM_009217 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99957.1 | |tss_id=mm_99957.1 | ||
Revision as of 04:03, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 113619332 |
|---|---|
| End of the center position in the TSS region: | 113619333 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000146390.2 NM_001042606 NM_009217 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5 |
| All_trans: | ENSMUST00000146390.2:0 NM_001042606:0 NM_009217:0 ENSMUST00000106630.1:130 X68951:135 |
TATA-Box annotation
| Distance to TSS: | 5 |
|---|---|
| Nearest PromoterID: | NM_009217 |
| Entrez ID: | 20606 |
| Nearest Unigene: | |
| Nearest Refseq: | NM_009217 |
| Nearest Ensembl: | ENSMUSG00000047904 |
| Gene Name: | somatostatin receptor 2 |
| Gene Alias: | SRIF-1|SS2R|SSTR-2|Smstr-2|Smstr2|sst2 |
| Gene Description: | somatostatin receptor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
