Difference between revisions of "TSS:Mm 99983.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NM_053273 | + | |all_trans=NM_053273:-7 AK155166:-7 AK154835:-15 ENSMUST00000141111.1:21 AK168408:21 AK156393:22 AK152172:22 AF329682:30 BC060740:30 ENSMUST00000045779.5:-44 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_053273 | |nearest_refseq=NM_053273 | ||
|nearest_unigene=Mm.271934 | |nearest_unigene=Mm.271934 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=mouse | |species=mouse | ||
|start=114675474 | |start=114675474 | ||
|start_of_center_position=114675484 | |start_of_center_position=114675484 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NM_053273 | + | |transcript_name=NM_053273 AK155166 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99983.1 | |tss_id=mm_99983.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q3TH73 | + | |uniprot_id=Q3TH73 |
}} | }} | ||
Revision as of 04:03, 22 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 114675484 |
|---|---|
| End of the center position in the TSS region: | 114675485 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_053273 AK155166 |
|---|---|
| Distance: | -7 |
| Num_trans: | 10 |
| All_trans: | NM_053273:-7 AK155166:-7 AK154835:-15 ENSMUST00000141111.1:21 AK168408:21 AK156393:22 AK152172:22 AF329682:30 BC060740:30 ENSMUST00000045779.5:-44 |
TATA-Box annotation
| Distance to TSS: | 17 |
|---|---|
| Nearest PromoterID: | NM_053273 |
| Entrez ID: | 117160 |
| Nearest Unigene: | Mm.271934 |
| Nearest Refseq: | NM_053273 |
| Nearest Ensembl: | ENSMUSG00000034714 |
| Gene Name: | tweety family member 2 |
| Gene Alias: | 1110001A03Rik |
| Gene Description: | tweety family member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
