Difference between revisions of "TSS:Mm 160998.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|B230354I04Rik= | |B230354I04Rik= | ||
| − | |all_trans=ENSMUST00000131046.1:-4 ENSMUST00000067754.10:-4 NM_001163753 | + | |all_trans=ENSMUST00000131046.1:-4 ENSMUST00000067754.10:-4 NM_001163753:-4 AK138293:-4 AK046260:-4 AK134576:350 AK046222:384 AK045995:393 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 10: | Line 10: | ||
|entrez_id=58222 | |entrez_id=58222 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| − | |gene_alias=B230331O03Rik | + | |gene_alias=B230331O03Rik{{!}}B230354I04Rik |
| − | |gene_description= | + | |gene_description=RAB37, member RAS oncogene family |
|gene_id=58222 | |gene_id=58222 | ||
| − | |gene_name= | + | |gene_name=RAB37, member RAS oncogene family |
|gene_source=MGI:1929945 | |gene_source=MGI:1929945 | ||
|gene_symbol=Rab37 | |gene_symbol=Rab37 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_021411 | |nearest_refseq=NM_021411 | ||
|nearest_unigene=Mm.143789 | |nearest_unigene=Mm.143789 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=mouse | |species=mouse | ||
|start=115091434 | |start=115091434 | ||
|start_of_center_position=115091434 | |start_of_center_position=115091434 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000131046.1 ENSMUST00000067754.10 NM_001163753 | + | |transcript_name=ENSMUST00000131046.1 ENSMUST00000067754.10 NM_001163753 AK138293 AK046260 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_160998.1 | |tss_id=mm_160998.1 | ||
Revision as of 15:50, 20 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 115091434 |
|---|---|
| End of the center position in the TSS region: | 115091435 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000131046.1 ENSMUST00000067754.10 NM_001163753 AK138293 AK046260 |
|---|---|
| Distance: | -4 |
| Num_trans: | 8 |
| All_trans: | ENSMUST00000131046.1:-4 ENSMUST00000067754.10:-4 NM_001163753:-4 AK138293:-4 AK046260:-4 AK134576:350 AK046222:384 AK045995:393 |
TATA-Box annotation
| Distance to TSS: | 4 |
|---|---|
| Nearest PromoterID: | NM_001163753 |
| Entrez ID: | 58222 |
| Nearest Unigene: | Mm.143789 |
| Nearest Refseq: | NM_021411 |
| Nearest Ensembl: | ENSMUSG00000020732 |
| Gene Name: | RAB37, member RAS oncogene family |
| Gene Alias: | B230331O03Rik|B230354I04Rik |
| Gene Description: | RAB37, member RAS oncogene family |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
