Difference between revisions of "TSS:Mm 100061.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000055490.8:-45 NM_172801 | + | |all_trans=ENSMUST00000055490.8:-45 NM_172801:-45 AK028866:-45 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_172801 | |nearest_refseq=NM_172801 | ||
|nearest_unigene=Mm.44542 | |nearest_unigene=Mm.44542 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=mouse | |species=mouse | ||
|start=115307207 | |start=115307207 | ||
|start_of_center_position=115307217 | |start_of_center_position=115307217 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000055490.8 NM_172801 | + | |transcript_name=ENSMUST00000055490.8 NM_172801 AK028866 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100061.1 | |tss_id=mm_100061.1 | ||
Revision as of 16:08, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 115307217 |
|---|---|
| End of the center position in the TSS region: | 115307218 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000055490.8 NM_172801 AK028866 |
|---|---|
| Distance: | -45 |
| Num_trans: | 3 |
| All_trans: | ENSMUST00000055490.8:-45 NM_172801:-45 AK028866:-45 |
TATA-Box annotation
| Distance to TSS: | 54 |
|---|---|
| Nearest PromoterID: | NM_172801 |
| Entrez ID: | 237987 |
| Nearest Unigene: | Mm.44542 |
| Nearest Refseq: | NM_172801 |
| Nearest Ensembl: | ENSMUSG00000050201 |
| Gene Name: | otopetrin 2 |
| Gene Alias: | 4732464P15 |
| Gene Description: | otopetrin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
