Difference between revisions of "TSS:Hg 113068.1"
From referenceTSS
| Line 3: | Line 3: | ||
|LYVE-1= | |LYVE-1= | ||
|XLKD1= | |XLKD1= | ||
| − | |all_trans=ENST00000525578 | + | |all_trans=ENST00000525578.1:59 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance=59 | |distance=59 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-24469 |
|end=10593138 | |end=10593138 | ||
|end_of_center_position=10593134 | |end_of_center_position=10593134 | ||
|entrez_id=10894 | |entrez_id=10894 | ||
|gc_percent=0.41791 | |gc_percent=0.41791 | ||
| − | |gene_alias=CRSBP-1 | + | |gene_alias=CRSBP-1{{!}}HAR{{!}}LYVE-1{{!}}XLKD1 |
|gene_description=lymphatic vessel endothelial hyaluronan receptor 1 | |gene_description=lymphatic vessel endothelial hyaluronan receptor 1 | ||
|gene_id=100129827 | |gene_id=100129827 | ||
| − | |gene_name= | + | |gene_name=IRAG1 antisense RNA 1 |
|gene_source=HGNC:43434 | |gene_source=HGNC:43434 | ||
| − | |gene_symbol= | + | |gene_symbol=IRAG1-AS1 |
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_006691 | |nearest_refseq=NM_006691 | ||
|nearest_unigene=Hs.655332 | |nearest_unigene=Hs.655332 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=10593129 | |start=10593129 | ||
|start_of_center_position=10593133 | |start_of_center_position=10593133 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000525578 | + | |transcript_name=ENST00000525578.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_113068.1 | |tss_id=hg_113068.1 | ||
Revision as of 21:11, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 10593133 |
|---|---|
| End of the center position in the TSS region: | 10593134 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000525578.1 |
|---|---|
| Distance: | 59 |
| Num_trans: | 1 |
| All_trans: | ENST00000525578.1:59 |
TATA-Box annotation
| Distance to TSS: | -24469 |
|---|---|
| Nearest PromoterID: | NM_006691 |
| Entrez ID: | 10894 |
| Nearest Unigene: | Hs.655332 |
| Nearest Refseq: | NM_006691 |
| Nearest Ensembl: | ENSG00000133800 |
| Gene Name: | IRAG1 antisense RNA 1 |
| Gene Alias: | CRSBP-1|HAR|LYVE-1|XLKD1 |
| Gene Description: | lymphatic vessel endothelial hyaluronan receptor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.41791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
