Difference between revisions of "TSS:Mm 109823.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|Gm10485= | |Gm10485= | ||
| − | |all_trans=ENSMUST00000144896.1:0 NR_045884 | + | |all_trans=ENSMUST00000144896.1:0 NR_045884:0 AK150533:0 |
|chr=chr12 | |chr=chr12 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 10: | Line 10: | ||
|entrez_id=100038522 | |entrez_id=100038522 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| − | |gene_alias= | + | |gene_alias=Gm10485 |
| − | |gene_description= | + | |gene_description=DNA methyltransferase 3A, opposite strand |
|gene_id=100038522 | |gene_id=100038522 | ||
| − | |gene_name= | + | |gene_name=DNA methyltransferase 3A, opposite strand |
|gene_source=MGI:3641689 | |gene_source=MGI:3641689 | ||
|gene_symbol=Dnmt3aos | |gene_symbol=Dnmt3aos | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NR_045884 | |nearest_refseq=NR_045884 | ||
|nearest_unigene=Mm.417270 | |nearest_unigene=Mm.417270 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=mouse | |species=mouse | ||
|start=3862234 | |start=3862234 | ||
|start_of_center_position=3862245 | |start_of_center_position=3862245 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000144896.1 NR_045884 | + | |transcript_name=ENSMUST00000144896.1 NR_045884 AK150533 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_109823.1 | |tss_id=mm_109823.1 | ||
Revision as of 19:57, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 3862245 |
|---|---|
| End of the center position in the TSS region: | 3862246 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000144896.1 NR_045884 AK150533 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3 |
| All_trans: | ENSMUST00000144896.1:0 NR_045884:0 AK150533:0 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NR_045884 |
| Entrez ID: | 100038522 |
| Nearest Unigene: | Mm.417270 |
| Nearest Refseq: | NR_045884 |
| Nearest Ensembl: | ENSMUSG00000073242 |
| Gene Name: | DNA methyltransferase 3A, opposite strand |
| Gene Alias: | Gm10485 |
| Gene Description: | DNA methyltransferase 3A, opposite strand |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
