Difference between revisions of "TSS:Hg 100529.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.15 |distance_to_tss=9 |entrez_id=138716 |gc_percent=0.781095 |gene_alias=C9orf23|bA296L22.5 |gene_description=ribonuclease P/MRP subunit p25 like |g...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000378959.8:0 ENST00000297613.4:0 NM_148179:0 NM_148178:0 uc003zuu.4:0 uc003zuv.4:0 BC032136:2 | ||
| + | |bA296L22.5= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
| + | |distance=0 | ||
|distance_to_tss=9 | |distance_to_tss=9 | ||
| + | |end=34612128 | ||
|entrez_id=138716 | |entrez_id=138716 | ||
|gc_percent=0.781095 | |gc_percent=0.781095 | ||
|gene_alias=C9orf23|bA296L22.5 | |gene_alias=C9orf23|bA296L22.5 | ||
|gene_description=ribonuclease P/MRP subunit p25 like | |gene_description=ribonuclease P/MRP subunit p25 like | ||
| − | |gene_name=RPP25L | + | |gene_id=138716 |
| + | |gene_name=ribonuclease P/MRP 25kDa subunit-like | ||
| + | |gene_source=HGNC:19909 | ||
| + | |gene_symbol=RPP25L | ||
| + | |gene_synonyms=MGC29635 bA296L22.5 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:19909 | ||
|nearest_ensembl=ENSG00000164967 | |nearest_ensembl=ENSG00000164967 | ||
|nearest_promoter_id=NM_148179 | |nearest_promoter_id=NM_148179 | ||
|nearest_refseq=NM_148178 | |nearest_refseq=NM_148178 | ||
|nearest_unigene=Hs.15961 | |nearest_unigene=Hs.15961 | ||
| + | |num_trans=7 | ||
| + | |species=human | ||
| + | |start=34612080 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000378959.8 ENST00000297613.4 NM_148179 NM_148178 uc003zuu.4 uc003zuv.4 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100529.1 | |tss_id=hg_100529.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q8N5L8 | ||
}} | }} | ||
Revision as of 17:11, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000378959.8 ENST00000297613.4 NM_148179 NM_148178 uc003zuu.4 uc003zuv.4 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | ENST00000378959.8:0 ENST00000297613.4:0 NM_148179:0 NM_148178:0 uc003zuu.4:0 uc003zuv.4:0 BC032136:2 |
TATA-Box annotation
| Distance to TSS: | 9 |
|---|---|
| Nearest PromoterID: | NM_148179 |
| Entrez ID: | 138716 |
| Nearest Unigene: | Hs.15961 |
| Nearest Refseq: | NM_148178 |
| Nearest Ensembl: | ENSG00000164967 |
| Gene Name: | ribonuclease P/MRP 25kDa subunit-like |
| Gene Alias: | C9orf23 |
| Gene Description: | ribonuclease P/MRP subunit p25 like |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.781095 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
