Difference between revisions of "TSS:Hg 119527.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|WDR94= | |WDR94= | ||
| − | |all_trans=ENST00000526606.1:148 | + | |all_trans=ENST00000526606.1:148 ENST00000528950.1:228 AK304530:238 NM_001300731:250 NM_001367469:250 NM_001367470:250 NM_001267783:250 NM_001267782:250 NM_001367471:250 ENST00000534300.5:252 AB051523:252 AK000301:254 AK057896:260 LF348016:271 MA583593:271 ENST00000531542.1:275 ENST00000533727.5:325 AL834190:325 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=148 | |distance=148 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-254 |
|end=46594281 | |end=46594281 | ||
|end_of_center_position=46594277 | |end_of_center_position=46594277 | ||
|entrez_id=55626 | |entrez_id=55626 | ||
|gc_percent=0.422886 | |gc_percent=0.422886 | ||
| − | |gene_alias=DCAF3 | + | |gene_alias=DCAF3{{!}}WDR94 |
|gene_description=autophagy and beclin 1 regulator 1 | |gene_description=autophagy and beclin 1 regulator 1 | ||
|gene_id=55626 | |gene_id=55626 | ||
| − | |gene_name=autophagy | + | |gene_name=autophagy and beclin 1 regulator 1 |
|gene_source=HGNC:25990 | |gene_source=HGNC:25990 | ||
|gene_symbol=AMBRA1 | |gene_symbol=AMBRA1 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:25990 | |hgnc_mgi_id=HGNC:25990 | ||
|nearest_ensembl=ENSG00000110497 | |nearest_ensembl=ENSG00000110497 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001367471 |
|nearest_refseq=NM_017749 | |nearest_refseq=NM_017749 | ||
|nearest_unigene=Hs.654644 | |nearest_unigene=Hs.654644 | ||
| Line 28: | Line 28: | ||
|start_of_center_position=46594276 | |start_of_center_position=46594276 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000526606 | + | |transcript_name=ENST00000526606.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_119527.1 | |tss_id=hg_119527.1 | ||
Revision as of 23:41, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 46594276 |
|---|---|
| End of the center position in the TSS region: | 46594277 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000526606.1 |
|---|---|
| Distance: | 148 |
| Num_trans: | 18 |
| All_trans: | ENST00000526606.1:148 ENST00000528950.1:228 AK304530:238 NM_001300731:250 NM_001367469:250 NM_001367470:250 NM_001267783:250 NM_001267782:250 NM_001367471:250 ENST00000534300.5:252 AB051523:252 AK000301:254 AK057896:260 LF348016:271 MA583593:271 ENST00000531542.1:275 ENST00000533727.5:325 AL834190:325 |
TATA-Box annotation
| Distance to TSS: | -254 |
|---|---|
| Nearest PromoterID: | NM_001367471 |
| Entrez ID: | 55626 |
| Nearest Unigene: | Hs.654644 |
| Nearest Refseq: | NM_017749 |
| Nearest Ensembl: | ENSG00000110497 |
| Gene Name: | autophagy and beclin 1 regulator 1 |
| Gene Alias: | DCAF3|WDR94 |
| Gene Description: | autophagy and beclin 1 regulator 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.422886 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
