Difference between revisions of "TSS:Hg 107390.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.16 |distance_to_tss=-21 |entrez_id=11101 |gc_percent=0.746269 |gene_alias=- |gene_description=arginyltransferase 1 |gene_name=ATE1 |gene_type=protei...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000437593.1:226 NR_120495:226 uc057wlx.1:226 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
| + | |distance=226 | ||
|distance_to_tss=-21 | |distance_to_tss=-21 | ||
| + | |end=121928086 | ||
|entrez_id=11101 | |entrez_id=11101 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=arginyltransferase 1 | |gene_description=arginyltransferase 1 | ||
| − | |gene_name=ATE1 | + | |gene_id=100130887 |
| + | |gene_name=ATE1 antisense RNA 1 | ||
| + | |gene_source=HGNC:49496 | ||
| + | |gene_symbol=ATE1-AS1 | ||
| + | |gene_synonyms=ENST00000437593 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:49496 | ||
|nearest_ensembl=ENSG00000107669 | |nearest_ensembl=ENSG00000107669 | ||
|nearest_promoter_id=NM_001288735 | |nearest_promoter_id=NM_001288735 | ||
|nearest_refseq=NM_007041 | |nearest_refseq=NM_007041 | ||
|nearest_unigene=Hs.632080 | |nearest_unigene=Hs.632080 | ||
| + | |num_trans=3 | ||
| + | |species=human | ||
| + | |start=121928081 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000437593.1 NR_120495 uc057wlx.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_107390.1 | |tss_id=hg_107390.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 22:59, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000437593.1 NR_120495 uc057wlx.1 |
|---|---|
| Distance: | 226 |
| Num_trans: | 3 |
| All_trans: | ENST00000437593.1:226 NR_120495:226 uc057wlx.1:226 |
TATA-Box annotation
| Distance to TSS: | -21 |
|---|---|
| Nearest PromoterID: | NM_001288735 |
| Entrez ID: | 11101 |
| Nearest Unigene: | Hs.632080 |
| Nearest Refseq: | NM_007041 |
| Nearest Ensembl: | ENSG00000107669 |
| Gene Name: | ATE1 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | arginyltransferase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
