Difference between revisions of "TSS:Hg 154760.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |HJMD= | ||
| + | |PCAD= | ||
|all_trans=ENST00000429102.6:-5 uc059who.1:-5 BC014462:-5 ENST00000264012.8:-162 NM_001793:-162 NM_001317195:-162 NM_001317196:-162 uc002ewf.3:-162 BC041846:-162 ENST00000542274.5:297 uc059whp.1:297 AK296968:297 AK312554:299 AK225396:306 X63629:323 AB527800:373 EU832319:374 EU832404:374 KJ904433:374 | |all_trans=ENST00000429102.6:-5 uc059who.1:-5 BC014462:-5 ENST00000264012.8:-162 NM_001793:-162 NM_001317195:-162 NM_001317196:-162 uc002ewf.3:-162 BC041846:-162 ENST00000542274.5:297 uc059whp.1:297 AK296968:297 AK312554:299 AK225396:306 X63629:323 AB527800:373 EU832319:374 EU832404:374 KJ904433:374 | ||
|chr=chr16 | |chr=chr16 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=165 | |distance_to_tss=165 | ||
|end=68645004 | |end=68645004 | ||
| + | |end_of_center_position=68645001 | ||
|entrez_id=1001 | |entrez_id=1001 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
| − | |gene_alias=CDHP | + | |gene_alias=CDHP |
|gene_description=cadherin 3 | |gene_description=cadherin 3 | ||
|gene_id=1001 | |gene_id=1001 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=68644997 | |start=68644997 | ||
| + | |start_of_center_position=68645000 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000429102.6 uc059who.1 BC014462 | |transcript_name=ENST00000429102.6 uc059who.1 BC014462 | ||
Revision as of 20:34, 14 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 68645000 |
|---|---|
| End of the center position in the TSS region: | 68645001 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000429102.6 uc059who.1 BC014462 |
|---|---|
| Distance: | -5 |
| Num_trans: | 19 |
| All_trans: | ENST00000429102.6:-5 uc059who.1:-5 BC014462:-5 ENST00000264012.8:-162 NM_001793:-162 NM_001317195:-162 NM_001317196:-162 uc002ewf.3:-162 BC041846:-162 ENST00000542274.5:297 uc059whp.1:297 AK296968:297 AK312554:299 AK225396:306 X63629:323 AB527800:373 EU832319:374 EU832404:374 KJ904433:374 |
TATA-Box annotation
| Distance to TSS: | 165 |
|---|---|
| Nearest PromoterID: | NM_001317196 |
| Entrez ID: | 1001 |
| Nearest Unigene: | Hs.191842 |
| Nearest Refseq: | NM_001793 |
| Nearest Ensembl: | ENSG00000062038 |
| Gene Name: | cadherin 15; cadherin 3 |
| Gene Alias: | CDHP |
| Gene Description: | cadherin 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
